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Aliases for LOC105375001 Gene

Subcategory (RNA class) for LOC105375001 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375001 Gene

  • Uncharacterized LOC105375001 3

External Ids for LOC105375001 Gene

Previous GeneCards Identifiers for LOC105375001 Gene

  • GC06U903165

Summaries for LOC105375001 Gene

GeneCards Summary for LOC105375001 Gene

LOC105375001 (Uncharacterized LOC105375001) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375001 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375001 Gene

Genomics for LOC105375001 Gene

GeneHancer (GH) Regulatory Elements for LOC105375001 Gene

Promoters and enhancers for LOC105375001 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J027471 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 650.7 -0.5 -540 3.1 MLX FEZF1 DMAP1 IRF4 YY1 E2F8 ZNF143 SP3 NFYC PPARGC1A ZNF184 LOC105375001 ABT1 ZKSCAN3 ZKSCAN4 ZKSCAN8 HMGN4 ZSCAN9 ZNF204P ZNF391
GH06J027477 Enhancer 1.5 Ensembl ENCODE dbSUPER 0.4 +5.8 5810 2.8 ZFP64 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 ZC3H11A PPARGC1A MEF2D TRS-AGA2-2 TRD-GTC2-6 ABT1 ZKSCAN4 ZKSCAN8 ZKSCAN3 ZSCAN12 ZNF391 ZSCAN9 PGBD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375001 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375001 Gene

Genomic Locations for LOC105375001 Gene
chr6:27,473,191-27,480,803
(GRCh38/hg38)
Size:
7,613 bases
Orientation:
Plus strand

Genomic View for LOC105375001 Gene

Genes around LOC105375001 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375001 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375001 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375001 Gene

Proteins for LOC105375001 Gene

Post-translational modifications for LOC105375001 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375001 Gene

Domains & Families for LOC105375001 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375001 Gene

Function for LOC105375001 Gene

Phenotypes From GWAS Catalog for LOC105375001 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375001 Gene

Localization for LOC105375001 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375001 Gene

Pathways & Interactions for LOC105375001 Gene

SuperPathways for LOC105375001 Gene

No Data Available

Interacting Proteins for LOC105375001 Gene

Gene Ontology (GO) - Biological Process for LOC105375001 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375001 Gene

Drugs & Compounds for LOC105375001 Gene

No Compound Related Data Available

Transcripts for LOC105375001 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375001 Gene

No ASD Table

Relevant External Links for LOC105375001 Gene

GeneLoc Exon Structure for
LOC105375001

No data available for mRNA/cDNA for LOC105375001 Gene

Expression for LOC105375001 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375001 Gene

Orthologs for LOC105375001 Gene

No data available for Orthologs and Evolution for LOC105375001 Gene

Paralogs for LOC105375001 Gene

No data available for Paralogs for LOC105375001 Gene

Variants for LOC105375001 Gene

Sequence variations from dbSNP and Humsavar for LOC105375001 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1001045019 -- 27,472,693(+) C/T upstream_transcript_variant
rs1002605125 -- 27,472,773(+) G/A upstream_transcript_variant
rs1003004419 -- 27,476,325(+) G/C non_coding_transcript_variant
rs1003057986 -- 27,476,766(+) A/G non_coding_transcript_variant
rs1003281910 -- 27,476,611(+) TTTTTTTT/TTTTTTT/TTTTTTTTT non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375001 Gene

Disorders for LOC105375001 Gene

No disorders were found for LOC105375001 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375001 Gene

Publications for LOC105375001 Gene

No publications were found for LOC105375001 Gene.

Products for LOC105375001 Gene

Sources for LOC105375001 Gene

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