Aliases for LOC105374996 Gene

Subcategory (RNA class) for LOC105374996 Gene

ncRNA

Aliases for LOC105374996 Gene

  • Uncharacterized LOC105374996 3

External Ids for LOC105374996 Gene

Previous GeneCards Identifiers for LOC105374996 Gene

  • GC06U903019

Summaries for LOC105374996 Gene

GeneCards Summary for LOC105374996 Gene

LOC105374996 (Uncharacterized LOC105374996) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374996 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105374996 Gene

Genomics for LOC105374996 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105374996 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J028647 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas 0.4 +10.2 10190 2.1 GATAD2A TEAD4 PRDM10 ZNF629 NFKBIZ ZNF692 RCOR2 PRDM1 RXRB PATZ1 TRT-CGT3-1 ZSCAN12 ZSCAN23 ZKSCAN8 GPX5 SUMO2P1 ZBED9 LINC00533 ENSG00000287279 LOC105374996
GH06J028645 Enhancer 0.6 ENCODE 0.7 +4.6 4556 0.2 ZNF692 POLR2A ZGPAT TBP ADNP CHD4 CEBPB PRDM6 THAP11 TRIM28 TRA-TGC2-1 piR-36225-005 GPX5 LOC105374996 piR-38580-274 ENSG00000287279 ZBED9 TRIM27
GH06J028643 Enhancer 0.9 ENCODE 0.4 +5.0 5006 0.5 GATAD2A ZNF692 RCOR2 ZSCAN4 ZNF501 ZNF24 SOX6 ZNF37A ZNF561 ARNT TRA-TGC2-1 piR-36225-005 ZSCAN12 ZSCAN23 ZSCAN26 ZKSCAN8 ZSCAN9 ZNF311 PGBD1 ZKSCAN4
GH06J028644 Enhancer 0.5 ENCODE 0.4 +5.4 5426 0 SCRT2 OSR2 SCRT1 ZNF335 ZBTB33 ZBTB6 ZSCAN21 TRA-TGC2-1 piR-36225-005 GPX5 TRT-CGT3-1 LOC105374996 ENSG00000287279 ZBED9 TRIM27
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105374996 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105374996 Gene

Genomic Locations for LOC105374996 Gene
chr6:28,638,583-28,653,478
(GRCh38/hg38)
Size:
14,896 bases
Orientation:
Plus strand

Genomic View for LOC105374996 Gene

Genes around LOC105374996 on UCSC Golden Path with GeneCards custom track
LOC105374996 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105374996 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374996 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374996 Gene

Proteins for LOC105374996 Gene

Post-translational modifications for LOC105374996 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374996 Gene

Domains & Families for LOC105374996 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105374996 Gene

Function for LOC105374996 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374996 Gene

Localization for LOC105374996 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374996 Gene

Pathways & Interactions for LOC105374996 Gene

PathCards logo

SuperPathways for LOC105374996 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105374996 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105374996 Gene

Drugs & Compounds for LOC105374996 Gene

No Compound Related Data Available

Transcripts for LOC105374996 Gene

LOC105374996 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374996 Gene

No ASD Table

Relevant External Links for LOC105374996 Gene

GeneLoc Exon Structure for
LOC105374996

No data available for mRNA/cDNA for LOC105374996 Gene

Expression for LOC105374996 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374996 Gene

Orthologs for LOC105374996 Gene

No data available for Orthologs and Evolution for LOC105374996 Gene

Paralogs for LOC105374996 Gene

No data available for Paralogs for LOC105374996 Gene

Variants for LOC105374996 Gene

Additional dbSNP identifiers (rs#s) for LOC105374996 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374996 Gene

Disorders for LOC105374996 Gene

No disorders were found for LOC105374996 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374996 Gene

Publications for LOC105374996 Gene

No publications were found for LOC105374996 Gene.

No data available for Mastermind for LOC105374996 Gene

Products for LOC105374996 Gene

Sources for LOC105374996 Gene