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LOC105374985 Gene(RNA Gene)

Uncharacterized LOC105374985

GCID:
GC06M026673
GIFtS:
4
Genes Participants
UDN Logo

Aliases for LOC105374985 Gene

Subcategory (RNA class) for LOC105374985 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374985 Gene

  • Uncharacterized LOC105374985 3

External Ids for LOC105374985 Gene

Previous GeneCards Identifiers for LOC105374985 Gene

  • GC06U903142
  • GC06M026301
  • GC06M026485
  • GC06M026504
  • GC06M026531
  • GC06M026569
  • GC06M026595
  • GC06M026632

Summaries for LOC105374985 Gene

GeneCards Summary for LOC105374985 Gene

LOC105374985 (Uncharacterized LOC105374985) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374985 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374985 Gene

Genomics for LOC105374985 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for LOC105374985 Gene

Promoters and enhancers for LOC105374985 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J026283 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 650.7 -0.1 -80 3.8 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 HIST1H4H PIR54542 LOC105374985 PIR40221 TRX-CAT1-2 PIR50839 ABT1 BTN2A3P HMGN4 BTN2A1
GH06J026275 Enhancer 0.5 dbSUPER 0.4 +8.3 8283 2.9 OSR2 ZNF766 ZNF157 SCRT2 ZKSCAN1 HIST1H3E HIST1H2AE HIST1H4H HIST1H2BI LOC105374985
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374985 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374985 Gene

Genomic Locations for LOC105374985 Gene
chr6:26,280,354-26,285,027
(GRCh38/hg38)
Size:
4,674 bases
Orientation:
Minus strand

Genomic View for LOC105374985 Gene

Genes around LOC105374985 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374985 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374985 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105374985 Gene

Proteins for LOC105374985 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC105374985 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374985 Gene

Domains & Families for LOC105374985 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374985 Gene

Function for LOC105374985 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for LOC105374985 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374985 Gene

Localization for LOC105374985 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374985 Gene

Pathways & Interactions for LOC105374985 Gene

SuperPathways for LOC105374985 Gene

PathCards logo More details on SuperPathways for LOC105374985
No Data Available

Interacting Proteins for LOC105374985 Gene

Gene Ontology (GO) - Biological Process for LOC105374985 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374985 Gene

Drugs & Compounds for LOC105374985 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC105374985 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374985 Gene

No ASD Table

Relevant External Links for LOC105374985 Gene

GeneLoc Exon Structure for
LOC105374985

No data available for mRNA/cDNA for LOC105374985 Gene

Expression for LOC105374985 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374985 Gene

Orthologs for LOC105374985 Gene

No data available for Orthologs and Evolution for LOC105374985 Gene

Paralogs for LOC105374985 Gene

No data available for Paralogs for LOC105374985 Gene

Variants for LOC105374985 Gene

Sequence variations from dbSNP and Humsavar for LOC105374985 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000196206 -- 26,286,542(-) G/C upstream_transcript_variant
rs1000252632 -- 26,283,891(-) A/C intron_variant
rs1000942171 -- 26,280,562(-) C/A non_coding_transcript_variant
rs1001252156 -- 26,284,900(-) C/G non_coding_transcript_variant
rs1001310572 -- 26,280,158(-) T/C non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374985 Gene

Disorders for LOC105374985 Gene

No disorders were found for LOC105374985 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374985 Gene

Publications for LOC105374985 Gene

No publications were found for LOC105374985 Gene.

Products for LOC105374985 Gene

Sources for LOC105374985 Gene

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