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Aliases for LOC105374981 Gene

Subcategory (RNA class) for LOC105374981 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374981 Gene

  • Uncharacterized LOC105374981 3

External Ids for LOC105374981 Gene

Previous GeneCards Identifiers for LOC105374981 Gene

  • GC06U902981

Summaries for LOC105374981 Gene

GeneCards Summary for LOC105374981 Gene

LOC105374981 (Uncharacterized LOC105374981) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374981 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374981 Gene

Genomics for LOC105374981 Gene

GeneHancer (GH) Regulatory Elements for LOC105374981 Gene

Promoters and enhancers for LOC105374981 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J024925 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE dbSUPER 650.7 +0.0 37 16.4 HDGF PKNOX1 FOXA2 SMAD1 YBX1 GLI4 IRF4 TCF12 ARID2 ZNF207 LOC105374981 ENSG00000223623 HIST1H2BA HIST1H2BPS1 NUP50P2 HIST1H2AA RIPOR2 TDP2 ALDH5A1 C6orf62
GH06J024946 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +17.4 17402 9 HDGF PKNOX1 IRF4 EGR1 SCRT2 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 TDP2 PPIAP29 C6orf62 KIAA0319 ALDH5A1 MTCO2P33 LOC105374981 RIPOR2
GH06J024907 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 0.3 -23.3 -23254 6.9 CTCF MXI1 TFAP4 ZBTB6 ZSCAN4 SIN3A STAT5A EBF1 MCM2 ZNF335 RIPOR2 LOC105374981 ENSG00000282804
GH06J024917 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.5 -13481 5.3 SRF ATF4 POLR2A CEBPG PRDM1 TRIM28 ENSG00000229313 RIPOR2 C6orf62 TDP2 LOC105374981 ENSG00000282804
GH06J024923 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -9.5 -9477 2 CTCF USF1 MAX SIN3A GATA3 EED FOS RCOR1 RIPOR2 LOC105374981 ENSG00000282804
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374981 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374981 Gene

Genomic Locations for LOC105374981 Gene
chr6:24,933,921-24,950,491
(GRCh38/hg38)
Size:
16,571 bases
Orientation:
Plus strand

Genomic View for LOC105374981 Gene

Genes around LOC105374981 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374981 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374981 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374981 Gene

Proteins for LOC105374981 Gene

Post-translational modifications for LOC105374981 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374981 Gene

Domains & Families for LOC105374981 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374981 Gene

Function for LOC105374981 Gene

Phenotypes From GWAS Catalog for LOC105374981 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374981 Gene

Localization for LOC105374981 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374981 Gene

Pathways & Interactions for LOC105374981 Gene

SuperPathways for LOC105374981 Gene

No Data Available

Interacting Proteins for LOC105374981 Gene

Gene Ontology (GO) - Biological Process for LOC105374981 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374981 Gene

Drugs & Compounds for LOC105374981 Gene

No Compound Related Data Available

Transcripts for LOC105374981 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374981 Gene

No ASD Table

Relevant External Links for LOC105374981 Gene

GeneLoc Exon Structure for
LOC105374981

No data available for mRNA/cDNA for LOC105374981 Gene

Expression for LOC105374981 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374981 Gene

Orthologs for LOC105374981 Gene

No data available for Orthologs and Evolution for LOC105374981 Gene

Paralogs for LOC105374981 Gene

No data available for Paralogs for LOC105374981 Gene

Variants for LOC105374981 Gene

Sequence variations from dbSNP and Humsavar for LOC105374981 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000191620 -- 24,937,039(+) C/A intron_variant
rs1000448816 -- 24,947,490(+) C/T intron_variant
rs1000458751 -- 24,947,845(+) A/T intron_variant
rs1000503630 -- 24,935,500(+) T/G intron_variant
rs1000659431 -- 24,942,014(+) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374981 Gene

Disorders for LOC105374981 Gene

No disorders were found for LOC105374981 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374981 Gene

Publications for LOC105374981 Gene

No publications were found for LOC105374981 Gene.

Products for LOC105374981 Gene

Sources for LOC105374981 Gene

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