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Aliases for LOC105374974 Gene

Subcategory (RNA class) for LOC105374974 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374974 Gene

  • Uncharacterized LOC105374974 3
  • AL035401.1 5

External Ids for LOC105374974 Gene

Previous GeneCards Identifiers for LOC105374974 Gene

  • GC06U902849

Summaries for LOC105374974 Gene

GeneCards Summary for LOC105374974 Gene

LOC105374974 (Uncharacterized LOC105374974) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374974 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374974 Gene

Genomics for LOC105374974 Gene

GeneHancer (GH) Regulatory Elements for LOC105374974 Gene

Promoters and enhancers for LOC105374974 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J023179 Enhancer 1.1 VISTA Ensembl ENCODE 0.7 -3.8 -3799 2.2 POLR2A FOXP2 RCOR1 CHD2 LOC105374974 LOC102724749
GH06J023173 Enhancer 0.6 Ensembl ENCODE 0.7 +2.1 2053 3.4 JUND FOSL2 FOS GC06P023174 LOC105374974
GH06J022826 Enhancer 1.1 Ensembl ENCODE 0.1 +349.0 348990 3.7 PKNOX1 RAD21 RFX5 ZEB1 ZNF335 ZNF366 ZNF143 RCOR1 FOS ZNF654 GC06P022834 LOC105374972 LOC105374974
GH06J022891 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.1 +284.5 284545 1.5 ZBTB21 JUN RFX5 POLR2A RCOR1 PRDM10 FOSL2 FOS CREM MAFK GC06P022836 GC06P022834 RPL6P18 LOC105374974
GH06J022876 Enhancer 0.8 Ensembl ENCODE 0.1 +296.8 296771 7.3 NANOG ZNF189 JUN CEBPB REST NR2F2 SP1 JUND POLR2A POU5F1 RN7SKP240 GC06P022836 GC06P022834 RPL6P18 LOC105374974
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374974 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374974 Gene

Genomic Locations for LOC105374974 Gene
chr6:22,744,395-23,177,072
(GRCh38/hg38)
Size:
432,678 bases
Orientation:
Minus strand
chr6:22,744,624-23,032,009
(GRCh37/hg19)
Size:
287,386 bases
Orientation:
Minus strand

Genomic View for LOC105374974 Gene

Genes around LOC105374974 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374974 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374974 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374974 Gene

Proteins for LOC105374974 Gene

Post-translational modifications for LOC105374974 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374974 Gene

Domains & Families for LOC105374974 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374974 Gene

Function for LOC105374974 Gene

Phenotypes From GWAS Catalog for LOC105374974 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374974 Gene

Localization for LOC105374974 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374974 Gene

Pathways & Interactions for LOC105374974 Gene

SuperPathways for LOC105374974 Gene

No Data Available

Interacting Proteins for LOC105374974 Gene

Gene Ontology (GO) - Biological Process for LOC105374974 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374974 Gene

Drugs & Compounds for LOC105374974 Gene

No Compound Related Data Available

Transcripts for LOC105374974 Gene

mRNA/cDNA for LOC105374974 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374974 Gene

No ASD Table

Relevant External Links for LOC105374974 Gene

GeneLoc Exon Structure for
LOC105374974

Expression for LOC105374974 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374974 Gene

Orthologs for LOC105374974 Gene

Evolution for LOC105374974 Gene

ENSEMBL:
Gene Tree for LOC105374974 (if available)
TreeFam:
Gene Tree for LOC105374974 (if available)

No data available for Orthologs for LOC105374974 Gene

Paralogs for LOC105374974 Gene

No data available for Paralogs for LOC105374974 Gene

Variants for LOC105374974 Gene

Sequence variations from dbSNP and Humsavar for LOC105374974 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000010276 -- 23,064,824(-) G/A/C genic_downstream_transcript_variant, intron_variant
rs1000015554 -- 23,146,496(-) T/C intron_variant
rs1000053592 -- 23,079,230(-) C/A genic_downstream_transcript_variant, intron_variant
rs1000057733 -- 23,130,271(-) G/A intron_variant
rs1000075505 -- 23,168,957(-) G/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374974 Gene

Disorders for LOC105374974 Gene

No disorders were found for LOC105374974 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374974 Gene

Publications for LOC105374974 Gene

No publications were found for LOC105374974 Gene.

Products for LOC105374974 Gene

Sources for LOC105374974 Gene

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