Aliases for LOC105374971 Gene

Data sources for LOC105374971 Gene:

RNA type for LOC105374971 Gene

ncRNA

Aliases for LOC105374971 Gene

External Ids for LOC105374971 Gene

Previous GeneCards Identifiers for LOC105374971 Gene

  • GC06U902951

Summaries for LOC105374971 Gene

GeneCards Summary for LOC105374971 Gene

LOC105374971 (Uncharacterized LOC105374971) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374971 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105374971 Gene

Genomics for LOC105374971 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105374971 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J022362 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 0.4 +16.0 15982 5.7 JUND YY1 BCL11A ZNF217 MBD2 CTBP1 FOXA2 RXRA CUX1 ZBTB33 piR-39098-235 piR-44727-006 LOC105374971 PRL HDGFL1 CASC15
GH06J022360 Enhancer 0.4 Ensembl 0.4 +11.5 11521 0.6 JUNB ZBED1 SPI1 RAD51 piR-39098-235 LOC105374971 piR-44727-006 PRL HDGFL1 CASC15
GH06J022445 Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas 0.2 +97.9 97921 5.8 MAFF ZNF316 MAFK MAFG FOS NR2F2 EP300 EZH2 EMSY piR-50030 piR-57460-582 LOC105374971 HDGFL1 PRL CASC15
GH06J022470 Enhancer 1 Ensembl ENCODE CraniofacialAtlas 0.1 +122.2 122221 2.8 YY1 FEZF1 CTCF FOXA2 RXRA ZBTB33 PRDM6 JUND HNF4A FOXA1 piR-33605-373 piR-35002-049 HDGFL1 LOC105374971 PRL CASC15
GH06J022352 Enhancer 0.2 Ensembl 0.7 +3.5 3521 0.2 LOC105374971 piR-36573-059 PRL HDGFL1 CASC15
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105374971 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105374971 Gene

Latest Assembly
chr6:22,349,180-22,590,314
(GRCh38/hg38)
Size:
241,135 bases
Orientation:
Plus strand

Genomic View for LOC105374971 Gene

Genes around LOC105374971 on UCSC Golden Path with GeneCards custom track
LOC105374971 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105374971 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374971 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374971 Gene

Proteins for LOC105374971 Gene

Post-translational modifications for LOC105374971 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374971 Gene

Domains & Families for LOC105374971 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105374971 Gene

Function for LOC105374971 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374971 Gene

Localization for LOC105374971 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374971 Gene

Pathways & Interactions for LOC105374971 Gene

PathCards logo

SuperPathways for LOC105374971 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105374971 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105374971 Gene

Drugs & Compounds for LOC105374971 Gene

No Compound Related Data Available

Transcripts for LOC105374971 Gene

LOC105374971 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374971 Gene

No ASD Table

Relevant External Links for LOC105374971 Gene

GeneLoc Exon Structure for
LOC105374971

No data available for mRNA/cDNA for LOC105374971 Gene

Expression for LOC105374971 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374971 Gene

Orthologs for LOC105374971 Gene

No data available for Orthologs and Evolution for LOC105374971 Gene

Paralogs for LOC105374971 Gene

No data available for Paralogs for LOC105374971 Gene

Variants for LOC105374971 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105374971 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374971 Gene

Disorders for LOC105374971 Gene

No disorders were found for LOC105374971 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374971 Gene

Publications for LOC105374971 Gene

No publications were found for LOC105374971 Gene.

No data available for Mastermind for LOC105374971 Gene

Products for LOC105374971 Gene

Sources for LOC105374971 Gene