Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105374955 Gene

Subcategory (RNA class) for LOC105374955 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374955 Gene

  • Uncharacterized LOC105374955 3

External Ids for LOC105374955 Gene

Previous GeneCards Identifiers for LOC105374955 Gene

  • GC06U903139

Summaries for LOC105374955 Gene

GeneCards Summary for LOC105374955 Gene

LOC105374955 (Uncharacterized LOC105374955) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374955 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374955 Gene

Genomics for LOC105374955 Gene

GeneHancer (GH) Regulatory Elements for LOC105374955 Gene

Promoters and enhancers for LOC105374955 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I018493 Enhancer 0.8 ENCODE dbSUPER 0.8 -2.9 -2851 0.2 DPF2 ZBTB40 FOXA1 SP1 ZNF217 GATA3 JUND ESR1 SPI1 RNU6-263P LOC105374955 PIR57948
GH06I018503 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +7.3 7335 1.5 ELF3 ATF1 FOXA2 ARNT ARID4B ZBTB40 ZNF2 ZSCAN9 RAD21 YY1 RNU6-263P RNF144B LOC105374955 MIR548A1HG
GH06I018487 Enhancer 0.8 ENCODE dbSUPER 0.4 -8.0 -7950 1.9 PKNOX1 BCL11A NR2F1 IKZF1 ATF7 DPF2 IKZF2 ZBTB40 RNF144B LOC105374955 PIR57948
GH06I018501 Enhancer 0.7 Ensembl ENCODE 0.4 +5.1 5117 1.5 HLF CEBPA ZNF266 CEBPB CEBPG TEAD3 NUP153 LOC105374952 DEK RNU6-263P LOC105374955 MIR548A1HG
GH06I018477 Enhancer 0.6 Ensembl dbSUPER 0.4 -19.0 -19035 0.4 ATF4 BCL6B RNU6-263P PIR57948 LOC105374955
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374955 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374955 Gene

Genomic Locations for LOC105374955 Gene
chr6:18,496,636-18,517,420
(GRCh38/hg38)
Size:
20,785 bases
Orientation:
Plus strand

Genomic View for LOC105374955 Gene

Genes around LOC105374955 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374955 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374955 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374955 Gene

Proteins for LOC105374955 Gene

Post-translational modifications for LOC105374955 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374955 Gene

Domains & Families for LOC105374955 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374955 Gene

Function for LOC105374955 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374955 Gene

Localization for LOC105374955 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374955 Gene

Pathways & Interactions for LOC105374955 Gene

SuperPathways for LOC105374955 Gene

No Data Available

Interacting Proteins for LOC105374955 Gene

Gene Ontology (GO) - Biological Process for LOC105374955 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374955 Gene

Drugs & Compounds for LOC105374955 Gene

No Compound Related Data Available

Transcripts for LOC105374955 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374955 Gene

No ASD Table

Relevant External Links for LOC105374955 Gene

GeneLoc Exon Structure for
LOC105374955

No data available for mRNA/cDNA for LOC105374955 Gene

Expression for LOC105374955 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374955 Gene

Orthologs for LOC105374955 Gene

No data available for Orthologs and Evolution for LOC105374955 Gene

Paralogs for LOC105374955 Gene

No data available for Paralogs for LOC105374955 Gene

Variants for LOC105374955 Gene

Sequence variations from dbSNP and Humsavar for LOC105374955 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000334804 -- 18,513,711(+) C/G/T intron_variant
rs1000532258 -- 18,508,587(+) T/G intron_variant
rs1000564794 -- 18,508,255(+) C/T intron_variant
rs1000750547 -- 18,502,149(+) G/A intron_variant
rs1000811909 -- 18,513,417(+) A/G/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374955 Gene

Disorders for LOC105374955 Gene

No disorders were found for LOC105374955 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374955 Gene

Publications for LOC105374955 Gene

No publications were found for LOC105374955 Gene.

Products for LOC105374955 Gene

Sources for LOC105374955 Gene

Content
Loading form....