Aliases for LOC105374953 Gene

Subcategory (RNA class) for LOC105374953 Gene

ncRNA

Aliases for LOC105374953 Gene

  • Uncharacterized LOC105374953 3

External Ids for LOC105374953 Gene

Previous GeneCards Identifiers for LOC105374953 Gene

  • GC06U903214

Summaries for LOC105374953 Gene

GeneCards Summary for LOC105374953 Gene

LOC105374953 (Uncharacterized LOC105374953) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374953 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105374953 Gene

Genomics for LOC105374953 Gene

GeneHancer (GH) Regulatory Elements for LOC105374953 Gene

Promoters and enhancers for LOC105374953 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J017850 Enhancer 0.9 Ensembl ENCODE dbSUPER 500.7 +1.3 1267 3.4 ZNF316 MYNN GATA3 FOS JUND HDAC2 PRDM6 ATF2 CEBPB KDM1A LOC105374953 KIF13A NHLRC1 piR-50444-388 RF00017-5320 RF00017-5321
GH06J017847 Enhancer 0.8 Ensembl dbSUPER 0.7 -2.7 -2733 1.8 RBM25 BCOR FOS CBX1 ADNP GATA2 JUN ZMYM3 KDM1A PHF20 NHLRC1 KIF13A ENSG00000272269 LOC105374953 lnc-NUP153-5 RF00017-5320 RF00017-5321
GH06J017844 Enhancer 0.9 Ensembl 0.4 -6.9 -6880 0.9 AFF1 KLF4 NR3C1 MYC RUNX1 CTBP1 NFRKB MIER1 NCOR1 MBD2 KIF13A NHLRC1 LOC105374953 lnc-NUP153-5 RF00017-5320 RF00017-5321
GH06J017819 Enhancer 1.1 Ensembl ENCODE 0.3 -30.1 -30133 1 CTCF USF1 ZBTB11 AFF1 REST USF2 TOE1 MYC CTBP1 TAF9B DEK NHLRC1 KIF13A lnc-NUP153-5 LOC105374953 RF00017-5320 RF00017-5321
GH06J017830 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -19.1 -19071 1.7 FOS GATA2 JUN POLR2A MYC ZNF24 FOXJ2 ENSG00000272269 lnc-NUP153-5 LOC105374953 RF00017-5320 KIF13A RF00017-5321
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105374953 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374953 Gene

Genomic Locations for LOC105374953 Gene
chr6:17,850,434-17,853,690
(GRCh38/hg38)
Size:
3,257 bases
Orientation:
Plus strand

Genomic View for LOC105374953 Gene

Genes around LOC105374953 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374953 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374953 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374953 Gene

Proteins for LOC105374953 Gene

Post-translational modifications for LOC105374953 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374953 Gene

Domains & Families for LOC105374953 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105374953 Gene

Function for LOC105374953 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374953 Gene

Localization for LOC105374953 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374953 Gene

Pathways & Interactions for LOC105374953 Gene

PathCards logo

SuperPathways for LOC105374953 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105374953 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105374953 Gene

Drugs & Compounds for LOC105374953 Gene

No Compound Related Data Available

Transcripts for LOC105374953 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374953 Gene

No ASD Table

Relevant External Links for LOC105374953 Gene

GeneLoc Exon Structure for
LOC105374953

No data available for mRNA/cDNA for LOC105374953 Gene

Expression for LOC105374953 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374953 Gene

Orthologs for LOC105374953 Gene

No data available for Orthologs and Evolution for LOC105374953 Gene

Paralogs for LOC105374953 Gene

No data available for Paralogs for LOC105374953 Gene

Variants for LOC105374953 Gene

Additional dbSNP identifiers (rs#s) for LOC105374953 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374953 Gene

Disorders for LOC105374953 Gene

No disorders were found for LOC105374953 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374953 Gene

Publications for LOC105374953 Gene

No publications were found for LOC105374953 Gene.

No data available for Mastermind for LOC105374953 Gene

Products for LOC105374953 Gene

Sources for LOC105374953 Gene