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Aliases for LOC105374946 Gene

Subcategory (RNA class) for LOC105374946 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374946 Gene

  • Uncharacterized LOC105374946 3

External Ids for LOC105374946 Gene

Previous GeneCards Identifiers for LOC105374946 Gene

  • GC06U903212

Summaries for LOC105374946 Gene

GeneCards Summary for LOC105374946 Gene

LOC105374946 (Uncharacterized LOC105374946) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374946 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374946 Gene

Genomics for LOC105374946 Gene

GeneHancer (GH) Regulatory Elements for LOC105374946 Gene

Promoters and enhancers for LOC105374946 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I015148 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +28.3 28328 1 INSM2 KLF17 ZNF76 FEZF1 ZNF335 GLIS2 ZNF213 ZNF366 FOS ATF7 RPL6P17 JARID2 LOC105374946 RN7SL332P
GH06I015131 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 +43.8 43820 2.4 MEIS2 KLF17 ZKSCAN1 FOSL1 ZFHX2 ZNF316 POLR2A NFE2 FOSL2 FOS RPL6P17 RN7SL332P LOC105374946
GH06I015151 Enhancer 0.7 ENCODE 0.3 +25.5 25528 0.2 PKNOX1 EBF1 BATF IRF4 RELA ATF7 BCLAF1 IKZF2 RUNX3 RXRA LOC105374946 RN7SL332P
GH06I015152 Enhancer 0.6 dbSUPER 0.3 +23.6 23624 1.3 MTA2 TEAD4 TAL1 CBFA2T3 TCF12 ATF4 CTBP1 POLR2A IKZF1 CBFA2T2 JARID2 LOC105374946 RN7SL332P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374946 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374946 Gene

Genomic Locations for LOC105374946 Gene
chr6:15,143,785-15,176,913
(GRCh38/hg38)
Size:
33,129 bases
Orientation:
Minus strand

Genomic View for LOC105374946 Gene

Genes around LOC105374946 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374946 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374946 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374946 Gene

Proteins for LOC105374946 Gene

Post-translational modifications for LOC105374946 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374946 Gene

Domains & Families for LOC105374946 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374946 Gene

Function for LOC105374946 Gene

Phenotypes From GWAS Catalog for LOC105374946 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374946 Gene

Localization for LOC105374946 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374946 Gene

Pathways & Interactions for LOC105374946 Gene

SuperPathways for LOC105374946 Gene

No Data Available

Interacting Proteins for LOC105374946 Gene

Gene Ontology (GO) - Biological Process for LOC105374946 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374946 Gene

Drugs & Compounds for LOC105374946 Gene

No Compound Related Data Available

Transcripts for LOC105374946 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374946 Gene

No ASD Table

Relevant External Links for LOC105374946 Gene

GeneLoc Exon Structure for
LOC105374946

No data available for mRNA/cDNA for LOC105374946 Gene

Expression for LOC105374946 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374946 Gene

Orthologs for LOC105374946 Gene

No data available for Orthologs and Evolution for LOC105374946 Gene

Paralogs for LOC105374946 Gene

No data available for Paralogs for LOC105374946 Gene

Variants for LOC105374946 Gene

Sequence variations from dbSNP and Humsavar for LOC105374946 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000155239 -- 15,152,141(-) G/A intron_variant
rs1000238659 -- 15,144,195(-) G/A intron_variant
rs1000281381 -- 15,144,237(-) T/C intron_variant
rs1000291434 -- 15,144,718(-) G/A intron_variant
rs1000397615 -- 15,171,893(-) T/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374946 Gene

Disorders for LOC105374946 Gene

No disorders were found for LOC105374946 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374946 Gene

Publications for LOC105374946 Gene

No publications were found for LOC105374946 Gene.

Products for LOC105374946 Gene

Sources for LOC105374946 Gene

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