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Aliases for LOC105374945 Gene

Subcategory (RNA class) for LOC105374945 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374945 Gene

  • Uncharacterized LOC105374945 3

External Ids for LOC105374945 Gene

Previous GeneCards Identifiers for LOC105374945 Gene

  • GC06U903225

Summaries for LOC105374945 Gene

GeneCards Summary for LOC105374945 Gene

LOC105374945 (Uncharacterized LOC105374945) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374945 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374945 Gene

Genomics for LOC105374945 Gene

GeneHancer (GH) Regulatory Elements for LOC105374945 Gene

Promoters and enhancers for LOC105374945 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J015021 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.4 -13.6 -13554 2.6 PKNOX1 ZSCAN4 SIN3A BMI1 BATF KLF5 ATF7 RCOR1 ETV6 IKZF2 JARID2 LOC105374945 GC06M015081 ENSG00000234261
GH06J015016 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 -8.5 -8496 1.1 HDAC1 ARNT NFRKB CHAMP1 ZNF766 SMARCA5 SMAD5 ZBTB2 CEBPB REST JARID2 JARID2-AS1 LOC105374945 GC06M015081 ENSG00000234261
GH06J015036 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -29.1 -29120 3.4 PKNOX1 CLOCK MLX ARNT ARID4B NEUROD1 SIN3A FEZF1 YY1 ZNF766 LOC105374945 GC06M015081 ENSG00000234261
GH06J015061 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -53.8 -53772 3.2 PKNOX1 ARNT FEZF1 ZNF2 ZNF766 SP3 REST ZNF592 MEF2D SMARCA4 JARID2 GC06M015081 ENSG00000234261 LOC105374945
GH06J015026 Enhancer 0.8 ENCODE 0.4 -18.0 -17977 0.2 ELF3 FOXA2 NEUROD1 SIN3A BMI1 RAD21 RARA YY1 RCOR1 THAP11 LOC105374945 GC06M015081 ENSG00000234261
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374945 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374945 Gene

Genomic Locations for LOC105374945 Gene
chr6:14,876,139-15,009,028
(GRCh38/hg38)
Size:
132,890 bases
Orientation:
Minus strand

Genomic View for LOC105374945 Gene

Genes around LOC105374945 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374945 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374945 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374945 Gene

Proteins for LOC105374945 Gene

Post-translational modifications for LOC105374945 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374945 Gene

Domains & Families for LOC105374945 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374945 Gene

Function for LOC105374945 Gene

Phenotypes From GWAS Catalog for LOC105374945 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374945 Gene

Localization for LOC105374945 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374945 Gene

Pathways & Interactions for LOC105374945 Gene

SuperPathways for LOC105374945 Gene

No Data Available

Interacting Proteins for LOC105374945 Gene

Gene Ontology (GO) - Biological Process for LOC105374945 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374945 Gene

Drugs & Compounds for LOC105374945 Gene

No Compound Related Data Available

Transcripts for LOC105374945 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374945 Gene

No ASD Table

Relevant External Links for LOC105374945 Gene

GeneLoc Exon Structure for
LOC105374945

No data available for mRNA/cDNA for LOC105374945 Gene

Expression for LOC105374945 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374945 Gene

Orthologs for LOC105374945 Gene

No data available for Orthologs and Evolution for LOC105374945 Gene

Paralogs for LOC105374945 Gene

No data available for Paralogs for LOC105374945 Gene

Variants for LOC105374945 Gene

Sequence variations from dbSNP and Humsavar for LOC105374945 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000011086 -- 14,893,048(-) T/C genic_downstream_transcript_variant, intron_variant
rs1000029041 -- 14,940,812(-) T/G genic_downstream_transcript_variant, intron_variant
rs1000056358 -- 14,946,497(-) G/A genic_downstream_transcript_variant, intron_variant
rs1000063917 -- 14,929,114(-) G/A/T genic_downstream_transcript_variant, intron_variant
rs1000104331 -- 14,943,504(-) T/A genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374945 Gene

Disorders for LOC105374945 Gene

No disorders were found for LOC105374945 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374945 Gene

Publications for LOC105374945 Gene

No publications were found for LOC105374945 Gene.

Products for LOC105374945 Gene

Sources for LOC105374945 Gene

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