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Aliases for LOC105374943 Gene

Subcategory (RNA class) for LOC105374943 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105374943 Gene

  • Uncharacterized LOC105374943 3
  • AL080313.2 5

External Ids for LOC105374943 Gene

Previous GeneCards Identifiers for LOC105374943 Gene

  • GC06U903016

Summaries for LOC105374943 Gene

GeneCards Summary for LOC105374943 Gene

LOC105374943 (Uncharacterized LOC105374943) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374943 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374943 Gene

Genomics for LOC105374943 Gene

GeneHancer (GH) Regulatory Elements for LOC105374943 Gene

Promoters and enhancers for LOC105374943 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I014392 Enhancer 0.7 dbSUPER 550.8 -0.4 -429 3.7 FOXA2 ZSCAN4 BACH1 EBF1 PYGO2 RAD21 RELA YY1 ZNF766 MCM3 ENSG00000234540 LOC105374943 LOC101928331
GH06I014390 Enhancer 0.6 dbSUPER 0.8 +2.8 2763 2.3 BCOR PKNOX1 ZMYM3 DPF2 FEZF1 ZNF335 CTBP1 PRDM6 SCRT2 ZSCAN5C RNU7-133P LOC105374943 GC06P014366
GH06I014379 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +12.0 12020 5.3 CTCF NR2F1 ETS1 RELA SP1 ZNF366 ZNF512 IKZF1 POU5F1 CREB1 RNU6-793P RNU7-133P LOC105374943 GC06P014366
GH06I014371 Enhancer 0.6 Ensembl dbSUPER 0.3 +22.5 22467 0.4 ZNF687 POLR2A IKZF1 GC06P014366 LOC105374943
GH06I014388 Enhancer 0.2 dbSUPER 0.8 +5.0 4952 0.9 RNU6-793P RNU7-133P LOC105374943 GC06P014366
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374943 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374943 Gene

Genomic Locations for LOC105374943 Gene
chr6:14,389,891-14,394,068
(GRCh38/hg38)
Size:
4,178 bases
Orientation:
Minus strand
chr6:14,391,462-14,393,519
(GRCh37/hg19)

Genomic View for LOC105374943 Gene

Genes around LOC105374943 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374943 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374943 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374943 Gene

Proteins for LOC105374943 Gene

Post-translational modifications for LOC105374943 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374943 Gene

Domains & Families for LOC105374943 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374943 Gene

Function for LOC105374943 Gene

Phenotypes From GWAS Catalog for LOC105374943 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374943 Gene

Localization for LOC105374943 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374943 Gene

Pathways & Interactions for LOC105374943 Gene

SuperPathways for LOC105374943 Gene

No Data Available

Interacting Proteins for LOC105374943 Gene

Gene Ontology (GO) - Biological Process for LOC105374943 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374943 Gene

Drugs & Compounds for LOC105374943 Gene

No Compound Related Data Available

Transcripts for LOC105374943 Gene

mRNA/cDNA for LOC105374943 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374943 Gene

No ASD Table

Relevant External Links for LOC105374943 Gene

GeneLoc Exon Structure for
LOC105374943

Expression for LOC105374943 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374943 Gene

Orthologs for LOC105374943 Gene

Evolution for LOC105374943 Gene

ENSEMBL:
Gene Tree for LOC105374943 (if available)
TreeFam:
Gene Tree for LOC105374943 (if available)

No data available for Orthologs for LOC105374943 Gene

Paralogs for LOC105374943 Gene

No data available for Paralogs for LOC105374943 Gene

Variants for LOC105374943 Gene

Sequence variations from dbSNP and Humsavar for LOC105374943 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000183265 -- 14,402,705(-) T/C upstream_transcript_variant
rs1000319478 -- 14,402,845(-) T/C upstream_transcript_variant
rs1000389661 -- 14,389,601(-) A/C downstream_transcript_variant
rs1000564588 -- 14,401,310(-) C/T genic_upstream_transcript_variant, non_coding_transcript_variant
rs1000936712 -- 14,401,079(-) C/T genic_upstream_transcript_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374943 Gene

Disorders for LOC105374943 Gene

No disorders were found for LOC105374943 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374943 Gene

Publications for LOC105374943 Gene

No publications were found for LOC105374943 Gene.

Products for LOC105374943 Gene

Sources for LOC105374943 Gene

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