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Aliases for LOC105374942 Gene

Subcategory (RNA class) for LOC105374942 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374942 Gene

  • Uncharacterized LOC105374942 3

External Ids for LOC105374942 Gene

Previous GeneCards Identifiers for LOC105374942 Gene

  • GC06U902658

Summaries for LOC105374942 Gene

GeneCards Summary for LOC105374942 Gene

LOC105374942 (Uncharacterized LOC105374942) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374942 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374942 Gene

Genomics for LOC105374942 Gene

GeneHancer (GH) Regulatory Elements for LOC105374942 Gene

Promoters and enhancers for LOC105374942 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J014458 Enhancer 0.9 ENCODE dbSUPER 650.7 +1.6 1604 0.2 NFATC3 BACH1 ZNF644 FOSL1 ZNF766 ZNF316 ARID2 FOS NFE2 MAFK LOC105374942 RNU6-793P LOC101928331
GH06J014464 Enhancer 1.1 Ensembl dbSUPER 0.7 -3.9 -3852 0.2 HDAC1 ARNT RAD21 RFX5 CHAMP1 TCF12 ZNF766 EGR1 SCRT2 FOS LOC105374942 LOC101928331 GC06P014501
GH06J014452 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +7.2 7183 2.1 HDGF HNRNPUL1 PKNOX1 ATF1 ARNT NCOA2 TCF12 ZNF766 GATA2 ZFP91 LOC105374942 LOC101928331
GH06J014476 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 -17.2 -17187 3 HDGF PKNOX1 ATF1 ARNT SIN3A TCF12 ZNF766 CBX5 GATA2 FOS RNU7-133P LOC105374942 GC06P014501 LOC101928331
GH06J014449 Enhancer 1.1 ENCODE dbSUPER 0.4 +10.7 10654 0.9 PKNOX1 SMAD1 ATF1 ARNT FEZF1 TCF12 ZNF766 CBX5 GATA2 ATF7 LOC105374942 LOC101928331
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374942 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374942 Gene

Genomic Locations for LOC105374942 Gene
chr6:14,424,257-14,460,449
(GRCh38/hg38)
Size:
36,193 bases
Orientation:
Minus strand

Genomic View for LOC105374942 Gene

Genes around LOC105374942 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374942 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374942 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374942 Gene

Proteins for LOC105374942 Gene

Post-translational modifications for LOC105374942 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374942 Gene

Domains & Families for LOC105374942 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374942 Gene

Function for LOC105374942 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374942 Gene

Localization for LOC105374942 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374942 Gene

Pathways & Interactions for LOC105374942 Gene

SuperPathways for LOC105374942 Gene

No Data Available

Interacting Proteins for LOC105374942 Gene

Gene Ontology (GO) - Biological Process for LOC105374942 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374942 Gene

Drugs & Compounds for LOC105374942 Gene

No Compound Related Data Available

Transcripts for LOC105374942 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374942 Gene

No ASD Table

Relevant External Links for LOC105374942 Gene

GeneLoc Exon Structure for
LOC105374942

No data available for mRNA/cDNA for LOC105374942 Gene

Expression for LOC105374942 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374942 Gene

Orthologs for LOC105374942 Gene

No data available for Orthologs and Evolution for LOC105374942 Gene

Paralogs for LOC105374942 Gene

No data available for Paralogs for LOC105374942 Gene

Variants for LOC105374942 Gene

Sequence variations from dbSNP and Humsavar for LOC105374942 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000052462 -- 14,428,771(-) A/G downstream_transcript_variant, genic_downstream_transcript_variant, intron_variant
rs1000273063 -- 14,435,175(-) A/C/G intron_variant
rs1000301666 -- 14,442,154(-) G/T intron_variant
rs1000403780 -- 14,428,381(-) A/G downstream_transcript_variant, genic_downstream_transcript_variant, intron_variant
rs1000438478 -- 14,442,395(-) G/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374942 Gene

Disorders for LOC105374942 Gene

No disorders were found for LOC105374942 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374942 Gene

Publications for LOC105374942 Gene

No publications were found for LOC105374942 Gene.

Products for LOC105374942 Gene

Sources for LOC105374942 Gene

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