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Aliases for LOC105374940 Gene

Subcategory (RNA class) for LOC105374940 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374940 Gene

  • Uncharacterized LOC105374940 3

External Ids for LOC105374940 Gene

Previous GeneCards Identifiers for LOC105374940 Gene

  • GC06U902706

Summaries for LOC105374940 Gene

GeneCards Summary for LOC105374940 Gene

LOC105374940 (Uncharacterized LOC105374940) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374940 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374940 Gene

Genomics for LOC105374940 Gene

GeneHancer (GH) Regulatory Elements for LOC105374940 Gene

Promoters and enhancers for LOC105374940 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I014210 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -10.2 -10161 2.5 ARNT ARID4B SIN3A DMAP1 ZNF2 ZNF766 ZNF213 E2F8 ZNF143 KLF13 CD83 RNU7-133P LOC105374940 ENSG00000230631
GH06I014216 Enhancer 0.9 FANTOM5 ENCODE dbSUPER 0.4 -16.4 -16417 1.9 HLF ZSCAN29 FOS HNF4A RAD21 RNU7-133P RNU6-793P CD83 ENSG00000230631 LOC105374940
GH06I014206 Enhancer 0.5 ENCODE 0.4 -6.2 -6244 2.6 RXRA POLR2A CEBPB HMBOX1 CEBPG FOSL2 RARA RNU7-133P LOC105374940 ENSG00000230631
GH06I014222 Enhancer 0.6 dbSUPER 0.3 -26.6 -26574 9.7 FOXA2 BHLHE40 EBF1 MNT DPF2 GATA3 ZNF512 IKZF1 IKZF2 SPI1 RNU6-793P RNU7-133P ENSG00000230631 LOC105374940
GH06I014209 Enhancer 0.4 ENCODE dbSUPER 0.4 -8.7 -8675 0.2 LOC105374940 ENSG00000230631
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374940 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374940 Gene

Genomic Locations for LOC105374940 Gene
chr6:14,194,449-14,201,140
(GRCh38/hg38)
Size:
6,692 bases
Orientation:
Minus strand

Genomic View for LOC105374940 Gene

Genes around LOC105374940 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374940 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374940 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374940 Gene

Proteins for LOC105374940 Gene

Post-translational modifications for LOC105374940 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374940 Gene

Domains & Families for LOC105374940 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374940 Gene

Function for LOC105374940 Gene

Phenotypes From GWAS Catalog for LOC105374940 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374940 Gene

Localization for LOC105374940 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374940 Gene

Pathways & Interactions for LOC105374940 Gene

SuperPathways for LOC105374940 Gene

No Data Available

Interacting Proteins for LOC105374940 Gene

Gene Ontology (GO) - Biological Process for LOC105374940 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374940 Gene

Drugs & Compounds for LOC105374940 Gene

No Compound Related Data Available

Transcripts for LOC105374940 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374940 Gene

No ASD Table

Relevant External Links for LOC105374940 Gene

GeneLoc Exon Structure for
LOC105374940

No data available for mRNA/cDNA for LOC105374940 Gene

Expression for LOC105374940 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374940 Gene

Orthologs for LOC105374940 Gene

No data available for Orthologs and Evolution for LOC105374940 Gene

Paralogs for LOC105374940 Gene

No data available for Paralogs for LOC105374940 Gene

Variants for LOC105374940 Gene

Sequence variations from dbSNP and Humsavar for LOC105374940 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000469280 -- 14,196,625(-) G/C intron_variant
rs1000480314 -- 14,198,590(-) G/A intron_variant
rs1000579447 -- 14,203,543(-) G/C upstream_transcript_variant
rs1000789220 -- 14,199,038(-) C/T intron_variant
rs1001470407 -- 14,202,737(-) C/G upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374940 Gene

Disorders for LOC105374940 Gene

No disorders were found for LOC105374940 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374940 Gene

Publications for LOC105374940 Gene

No publications were found for LOC105374940 Gene.

Products for LOC105374940 Gene

Sources for LOC105374940 Gene

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