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Aliases for LOC105374936 Gene

Subcategory (RNA class) for LOC105374936 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374936 Gene

  • Uncharacterized LOC105374936 3

External Ids for LOC105374936 Gene

Previous GeneCards Identifiers for LOC105374936 Gene

  • GC06U902891

Summaries for LOC105374936 Gene

GeneCards Summary for LOC105374936 Gene

LOC105374936 (Uncharacterized LOC105374936) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374936 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374936 Gene

Genomics for LOC105374936 Gene

GeneHancer (GH) Regulatory Elements for LOC105374936 Gene

Promoters and enhancers for LOC105374936 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I013351 Enhancer 0.3 ENCODE 550.8 +0.4 365 0.8 ZBTB33 LOC105374936 TBC1D7 SIRT5 GFOD1 GC06P013360 GC06P013319
GH06I013353 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.4 +5.1 5123 5 PKNOX1 ATF1 ARNT SIN3A IRF4 NCOA2 TCF12 ZNF766 GATA2 FOS GFOD1 TBC1D7 SIRT5 GC06P013360 GC06M013357 LOC105374936 GC06P013319
GH06I013336 Enhancer 1 Ensembl ENCODE 0.4 -14.4 -14382 0.6 RB1 ARID4B ZNF2 RAD21 RFX5 ARID2 ZNF143 RCOR1 ATF7 IKZF2 TBC1D7 SIRT5 GFOD1 GFOD1-AS1 LOC105374936 GC06P013319 GC06P013321
GH06I013335 Enhancer 0.7 ENCODE 0.4 -16.0 -15999 0.2 JUN TEAD4 TAL1 KLF17 TCF12 ZFHX2 NCOR1 EGR1 CBFA2T2 TRIM24 SIRT5 GFOD1 TBC1D7 GC06P013321 GC06P013319 LOC105374936
GH06I013337 Enhancer 0.4 Ensembl ENCODE 0.4 -12.8 -12807 1 TBC1D7 SIRT5 GFOD1 GFOD1-AS1 LOC105374936 GC06P013319 GC06P013321
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374936 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374936 Gene

Genomic Locations for LOC105374936 Gene
chr6:13,351,083-13,354,188
(GRCh38/hg38)
Size:
3,106 bases
Orientation:
Plus strand

Genomic View for LOC105374936 Gene

Genes around LOC105374936 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374936 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374936 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374936 Gene

Proteins for LOC105374936 Gene

Post-translational modifications for LOC105374936 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374936 Gene

Domains & Families for LOC105374936 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374936 Gene

Function for LOC105374936 Gene

Phenotypes From GWAS Catalog for LOC105374936 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374936 Gene

Localization for LOC105374936 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374936 Gene

Pathways & Interactions for LOC105374936 Gene

SuperPathways for LOC105374936 Gene

No Data Available

Interacting Proteins for LOC105374936 Gene

Gene Ontology (GO) - Biological Process for LOC105374936 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374936 Gene

Drugs & Compounds for LOC105374936 Gene

No Compound Related Data Available

Transcripts for LOC105374936 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374936 Gene

No ASD Table

Relevant External Links for LOC105374936 Gene

GeneLoc Exon Structure for
LOC105374936

No data available for mRNA/cDNA for LOC105374936 Gene

Expression for LOC105374936 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374936 Gene

Orthologs for LOC105374936 Gene

No data available for Orthologs and Evolution for LOC105374936 Gene

Paralogs for LOC105374936 Gene

No data available for Paralogs for LOC105374936 Gene

Variants for LOC105374936 Gene

Sequence variations from dbSNP and Humsavar for LOC105374936 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000041868 -- 13,355,325(+) G/A non_coding_transcript_variant
rs1000250561 -- 13,354,224(+) T/C non_coding_transcript_variant
rs1000281503 -- 13,354,426(+) G/A non_coding_transcript_variant
rs1000292442 -- 13,349,656(+) G/A upstream_transcript_variant
rs1001003018 -- 13,354,293(+) G/A non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374936 Gene

Disorders for LOC105374936 Gene

No disorders were found for LOC105374936 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374936 Gene

Publications for LOC105374936 Gene

No publications were found for LOC105374936 Gene.

Products for LOC105374936 Gene

Sources for LOC105374936 Gene

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