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Aliases for LOC105374933 Gene

Subcategory (RNA class) for LOC105374933 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374933 Gene

  • Uncharacterized LOC105374933 3

External Ids for LOC105374933 Gene

Previous GeneCards Identifiers for LOC105374933 Gene

  • GC06U903237

Summaries for LOC105374933 Gene

GeneCards Summary for LOC105374933 Gene

LOC105374933 (Uncharacterized LOC105374933) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374933 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374933 Gene

Genomics for LOC105374933 Gene

GeneHancer (GH) Regulatory Elements for LOC105374933 Gene

Promoters and enhancers for LOC105374933 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I013229 Enhancer 0.7 ENCODE 550.8 +0.0 39 0.6 HDGF MLX EBF1 BATF RARA ZNF143 ATF7 ETV6 IKZF2 RUNX3 LOC105374933 GC06P013216 PHACTR1
GH06I013271 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 0.3 -44.2 -44211 4.7 HDGF HNRNPUL1 PKNOX1 SMAD1 ARNT IRF4 POLR2B ZNF766 ZNF143 ZNF592 TBC1D7 RPL15P3 ENSG00000215022 SIRT5 ENSG00000272379 PHACTR1 PIR62166 LOC105374933
GH06I013258 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -30.9 -30902 4.3 HDGF PKNOX1 RB1 BMI1 BATF KLF5 IRF4 ZNF207 ATF7 ETV6 TBC1D7 RNU1-11P ENSG00000215022 PHACTR1 GFOD1 RANBP9 PIR62166 LOC105374933
GH06I013234 Enhancer 0.4 ENCODE 0.8 -4.3 -4304 0 GATA3 MNT LOC105374933 PIR62166 PHACTR1
GH06I013248 Enhancer 0.7 Ensembl 0.4 -18.2 -18171 0.4 ZBTB21 FEZF1 THRB ZNF121 ZNF366 ZSCAN5C ZNF362 L3MBTL2 ZEB2 ATF2 TBC1D7 LOC105374933 PIR62166 PHACTR1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374933 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374933 Gene

Genomic Locations for LOC105374933 Gene
chr6:13,223,049-13,230,030
(GRCh38/hg38)
Size:
6,982 bases
Orientation:
Minus strand

Genomic View for LOC105374933 Gene

Genes around LOC105374933 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374933 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374933 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374933 Gene

Proteins for LOC105374933 Gene

Post-translational modifications for LOC105374933 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374933 Gene

Domains & Families for LOC105374933 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374933 Gene

Function for LOC105374933 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374933 Gene

Localization for LOC105374933 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374933 Gene

Pathways & Interactions for LOC105374933 Gene

SuperPathways for LOC105374933 Gene

No Data Available

Interacting Proteins for LOC105374933 Gene

Gene Ontology (GO) - Biological Process for LOC105374933 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374933 Gene

Drugs & Compounds for LOC105374933 Gene

No Compound Related Data Available

Transcripts for LOC105374933 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374933 Gene

No ASD Table

Relevant External Links for LOC105374933 Gene

GeneLoc Exon Structure for
LOC105374933

No data available for mRNA/cDNA for LOC105374933 Gene

Expression for LOC105374933 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374933 Gene

Orthologs for LOC105374933 Gene

No data available for Orthologs and Evolution for LOC105374933 Gene

Paralogs for LOC105374933 Gene

No data available for Paralogs for LOC105374933 Gene

Variants for LOC105374933 Gene

Sequence variations from dbSNP and Humsavar for LOC105374933 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000036141 -- 13,225,149(-) G/A intron_variant
rs1000135953 -- 13,231,584(-) C/G upstream_transcript_variant
rs1000484845 -- 13,224,285(-) A/G intron_variant
rs1000816106 -- 13,222,545(-) A/G downstream_transcript_variant
rs1001035527 -- 13,226,657(-) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374933 Gene

Disorders for LOC105374933 Gene

No disorders were found for LOC105374933 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374933 Gene

Publications for LOC105374933 Gene

No publications were found for LOC105374933 Gene.

Products for LOC105374933 Gene

Sources for LOC105374933 Gene

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