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Aliases for LOC105374931 Gene

Subcategory (RNA class) for LOC105374931 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374931 Gene

  • Uncharacterized LOC105374931 3

External Ids for LOC105374931 Gene

Previous GeneCards Identifiers for LOC105374931 Gene

  • GC06U902714

Summaries for LOC105374931 Gene

GeneCards Summary for LOC105374931 Gene

LOC105374931 (Uncharacterized LOC105374931) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374931 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374931 Gene

Genomics for LOC105374931 Gene

GeneHancer (GH) Regulatory Elements for LOC105374931 Gene

Promoters and enhancers for LOC105374931 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I012362 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -30.5 -30543 5.3 ZNF48 YY1 ZNF207 ATF7 ZNF548 RUNX3 RXRA JUNB REST ZNF623 HIVEP1 EDN1 RN7SKP293 LOC105374931 SUMO2P12
GH06I012370 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.3 -23.9 -23939 1.6 FOXA2 SMAD1 ZFP64 FEZF1 YY1 ATF7 FOS RXRA ZHX2 REST LOC105374931 SUMO2P12
GH06I012369 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.3 -25.3 -25348 0.9 HDGF CTCF PKNOX1 BACH1 EBF1 BATF KLF5 IRF4 RAD21 RELA HIVEP1 LOC105374931 SUMO2P12
GH06I012322 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -71.1 -71125 3.8 FOXA2 ARID4B NEUROD1 BRCA1 SLC30A9 ELK1 FOS SP5 MIER2 REST EDN1 RN7SKP293 SUMO2P12 LOC105374931
GH06I012330 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -63.2 -63215 2.9 ELF3 PKNOX1 FOXA2 SIN3A FEZF1 THRB RAD21 RARA FOS ELF1 RN7SKP293 SUMO2P12 LOC105374931
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374931 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374931 Gene

Genomic Locations for LOC105374931 Gene
chr6:12,395,474-12,407,661
(GRCh38/hg38)
Size:
12,188 bases
Orientation:
Plus strand

Genomic View for LOC105374931 Gene

Genes around LOC105374931 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374931 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374931 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374931 Gene

Proteins for LOC105374931 Gene

Post-translational modifications for LOC105374931 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374931 Gene

Domains & Families for LOC105374931 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374931 Gene

Function for LOC105374931 Gene

Phenotypes From GWAS Catalog for LOC105374931 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374931 Gene

Localization for LOC105374931 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374931 Gene

Pathways & Interactions for LOC105374931 Gene

SuperPathways for LOC105374931 Gene

No Data Available

Interacting Proteins for LOC105374931 Gene

Gene Ontology (GO) - Biological Process for LOC105374931 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374931 Gene

Drugs & Compounds for LOC105374931 Gene

No Compound Related Data Available

Transcripts for LOC105374931 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374931 Gene

No ASD Table

Relevant External Links for LOC105374931 Gene

GeneLoc Exon Structure for
LOC105374931

No data available for mRNA/cDNA for LOC105374931 Gene

Expression for LOC105374931 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374931 Gene

Orthologs for LOC105374931 Gene

No data available for Orthologs and Evolution for LOC105374931 Gene

Paralogs for LOC105374931 Gene

No data available for Paralogs for LOC105374931 Gene

Variants for LOC105374931 Gene

Sequence variations from dbSNP and Humsavar for LOC105374931 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000031113 -- 12,399,975(+) A/C intron_variant
rs1000168883 -- 12,400,600(+) TT/T intron_variant
rs1000246144 -- 12,393,880(+) G/A upstream_transcript_variant
rs1000324956 -- 12,394,385(+) C/T upstream_transcript_variant
rs1000403773 -- 12,394,657(+) T/C upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374931 Gene

Disorders for LOC105374931 Gene

No disorders were found for LOC105374931 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374931 Gene

Publications for LOC105374931 Gene

No publications were found for LOC105374931 Gene.

Products for LOC105374931 Gene

Sources for LOC105374931 Gene

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