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Aliases for LOC105374928 Gene

Subcategory (RNA class) for LOC105374928 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374928 Gene

  • Uncharacterized LOC105374928 3

External Ids for LOC105374928 Gene

Previous GeneCards Identifiers for LOC105374928 Gene

  • GC06U902838

Summaries for LOC105374928 Gene

GeneCards Summary for LOC105374928 Gene

LOC105374928 (Uncharacterized LOC105374928) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374928 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374928 Gene

Genomics for LOC105374928 Gene

GeneHancer (GH) Regulatory Elements for LOC105374928 Gene

Promoters and enhancers for LOC105374928 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I011426 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.4 +11.5 11472 3.9 HDGF PKNOX1 FOXA2 MLX ZNF133 YBX1 ZNF2 ZNF48 SLC30A9 GLIS2 HIVEP1 NEDD9 RNU1-64P THAP12P5 ENSG00000247925 ERVFRD-1 LOC105374928 LOC105374929 ENSG00000233656 ENSG00000242753
GH06I011431 Enhancer 1.2 Ensembl ENCODE 0.4 +16.4 16356 4.3 PKNOX1 CLOCK FOXA2 MLX ARID4B NEUROD1 SIN3A FEZF1 DMAP1 ZNF2 NEDD9 ENSG00000247925 ENSG00000233656 LOC105374928 LOC105374929 ENSG00000242753
GH06I011458 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.3 +42.9 42852 3.8 HDGF PKNOX1 RB1 BMI1 YBX1 BATF KLF5 IRF4 RAD21 ZNF366 ERVFRD-1 ENSG00000247925 ENSG00000233656 TMEM170B NEDD9 ENSG00000242753 LOC105374928 LOC105374929
GH06I011425 Enhancer 0.8 ENCODE 0.4 +8.4 8418 1.1 ELF3 FOXA2 MLX ARID4B DMAP1 RAD21 THRB ZNF48 RARA ETS1 NEDD9 RNU1-64P THAP12P5 ENSG00000247925 ENSG00000233656 LOC105374928 LOC105374929 ENSG00000242753
GH06I011495 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.2 +79.3 79300 2.2 PKNOX1 MLX ARNT ARID4B BRCA1 YY1 SLC30A9 ARID2 ZNF143 DEK TMEM170B ENSG00000247925 NEDD9 ENSG00000242753 RNU1-64P PIR46736 LOC105374928
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374928 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374928 Gene

Genomic Locations for LOC105374928 Gene
chr6:11,417,401-11,535,327
(GRCh38/hg38)
Size:
117,927 bases
Orientation:
Plus strand

Genomic View for LOC105374928 Gene

Genes around LOC105374928 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374928 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374928 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374928 Gene

Proteins for LOC105374928 Gene

Post-translational modifications for LOC105374928 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374928 Gene

Domains & Families for LOC105374928 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374928 Gene

Function for LOC105374928 Gene

Phenotypes From GWAS Catalog for LOC105374928 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374928 Gene

Localization for LOC105374928 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374928 Gene

Pathways & Interactions for LOC105374928 Gene

SuperPathways for LOC105374928 Gene

No Data Available

Interacting Proteins for LOC105374928 Gene

Gene Ontology (GO) - Biological Process for LOC105374928 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374928 Gene

Drugs & Compounds for LOC105374928 Gene

No Compound Related Data Available

Transcripts for LOC105374928 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374928 Gene

No ASD Table

Relevant External Links for LOC105374928 Gene

GeneLoc Exon Structure for
LOC105374928

No data available for mRNA/cDNA for LOC105374928 Gene

Expression for LOC105374928 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374928 Gene

Orthologs for LOC105374928 Gene

No data available for Orthologs and Evolution for LOC105374928 Gene

Paralogs for LOC105374928 Gene

No data available for Paralogs for LOC105374928 Gene

Variants for LOC105374928 Gene

Sequence variations from dbSNP and Humsavar for LOC105374928 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000002266 -- 11,499,746(+) T/C intron_variant
rs1000032307 -- 11,485,942(+) G/C intron_variant
rs1000061235 -- 11,452,986(+) A/G intron_variant
rs1000063100 -- 11,481,311(+) AAAACA/A intron_variant
rs1000064022 -- 11,442,289(+) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374928 Gene

Disorders for LOC105374928 Gene

Additional Disease Information for LOC105374928

No disorders were found for LOC105374928 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105374928 Gene

Publications for LOC105374928 Gene

No publications were found for LOC105374928 Gene.

Products for LOC105374928 Gene

Sources for LOC105374928 Gene

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