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Aliases for LOC105374882 Gene

Subcategory (RNA class) for LOC105374882 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374882 Gene

  • Uncharacterized LOC105374882 3

External Ids for LOC105374882 Gene

Previous GeneCards Identifiers for LOC105374882 Gene

  • GC06U903178

Summaries for LOC105374882 Gene

GeneCards Summary for LOC105374882 Gene

LOC105374882 (Uncharacterized LOC105374882) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374882 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374882 Gene

Genomics for LOC105374882 Gene

GeneHancer (GH) Regulatory Elements for LOC105374882 Gene

Promoters and enhancers for LOC105374882 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J001554 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.3 +25.8 25795 1.8 SIN3A RAD21 YY1 ZNF143 RCOR1 IKZF2 RUNX3 DEK SMARCA5 CEBPB LOC102723944 GC06M001550 ENSG00000272279 LOC105374882
GH06J001535 Enhancer 0.7 Ensembl 0.4 +6.4 6378 0.2 MXI1 MAX RFX5 POLR2A SMC3 RCOR1 CHD2 TCF7L2 DEK ELK4 LOC105374882 LOC102723944
GH06J001538 Enhancer 0.2 ENCODE 0.4 +9.6 9590 1.1 ELF2P2 ENSG00000272279 LOC105374882 LOC102723944
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374882 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374882 Gene

Genomic Locations for LOC105374882 Gene
chr6:1,529,123-1,544,090
(GRCh38/hg38)
Size:
14,968 bases
Orientation:
Plus strand

Genomic View for LOC105374882 Gene

Genes around LOC105374882 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374882 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374882 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374882 Gene

Proteins for LOC105374882 Gene

Post-translational modifications for LOC105374882 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374882 Gene

Domains & Families for LOC105374882 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374882 Gene

Function for LOC105374882 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374882 Gene

Localization for LOC105374882 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374882 Gene

Pathways & Interactions for LOC105374882 Gene

SuperPathways for LOC105374882 Gene

No Data Available

Interacting Proteins for LOC105374882 Gene

Gene Ontology (GO) - Biological Process for LOC105374882 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374882 Gene

Drugs & Compounds for LOC105374882 Gene

No Compound Related Data Available

Transcripts for LOC105374882 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374882 Gene

No ASD Table

Relevant External Links for LOC105374882 Gene

GeneLoc Exon Structure for
LOC105374882

No data available for mRNA/cDNA for LOC105374882 Gene

Expression for LOC105374882 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374882 Gene

Orthologs for LOC105374882 Gene

No data available for Orthologs and Evolution for LOC105374882 Gene

Paralogs for LOC105374882 Gene

No data available for Paralogs for LOC105374882 Gene

Variants for LOC105374882 Gene

Sequence variations from dbSNP and Humsavar for LOC105374882 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000038162 -- 1,538,252(+) C/T intron_variant
rs1000097033 -- 1,540,171(+) A/G intron_variant
rs1000377576 -- 1,533,647(+) A/G intron_variant
rs1000425236 -- 1,542,949(+) T/G intron_variant
rs1000433666 -- 1,527,897(+) G/C upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374882 Gene

Disorders for LOC105374882 Gene

No disorders were found for LOC105374882 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374882 Gene

Publications for LOC105374882 Gene

No publications were found for LOC105374882 Gene.

Products for LOC105374882 Gene

Sources for LOC105374882 Gene

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