Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105374852 Gene

Subcategory (RNA class) for LOC105374852 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374852 Gene

  • Uncharacterized LOC105374852 3

External Ids for LOC105374852 Gene

Previous GeneCards Identifiers for LOC105374852 Gene

  • GC02U903735

Summaries for LOC105374852 Gene

GeneCards Summary for LOC105374852 Gene

LOC105374852 (Uncharacterized LOC105374852) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374852 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374852 Gene

Genomics for LOC105374852 Gene

GeneHancer (GH) Regulatory Elements for LOC105374852 Gene

Promoters and enhancers for LOC105374852 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J088015 Promoter/Enhancer 1.6 Ensembl ENCODE 650.7 -0.1 -84 2.5 HDGF HNRNPUL1 PKNOX1 CLOCK FOXA2 SMAD1 MLX ARNT ARID4B SIN3A RNU2-63P LOC105374852 LOC102724642 LOC730268 ENSG00000231259 LOC100420889 RPIA KRCC1 EIF2AK3 THNSL2
GH02J088022 Enhancer 0.9 ENCODE 0.4 +5.4 5426 0.2 PKNOX1 ATF1 ARNT TCF12 ATF7 NCOA1 REST KAT8 NFIL3 ATF4 KRCC1 PIR45221 LOC105374852
GH02J088027 Enhancer 0.5 Ensembl ENCODE 0.4 +11.3 11266 0.9 SRF PIR45221 KRCC1 THNSL2 LOC105374852
GH02J088024 Enhancer 0.4 ENCODE 0.4 +7.8 7827 0.6 PKNOX1 POLR2A KRCC1 THNSL2 PIR45221 LOC105374852
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374852 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374852 Gene

Genomic Locations for LOC105374852 Gene
chr2:88,016,791-88,021,354
(GRCh38/hg38)
Size:
4,564 bases
Orientation:
Plus strand

Genomic View for LOC105374852 Gene

Genes around LOC105374852 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374852 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374852 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374852 Gene

Proteins for LOC105374852 Gene

Post-translational modifications for LOC105374852 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374852 Gene

Domains & Families for LOC105374852 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374852 Gene

Function for LOC105374852 Gene

Phenotypes From GWAS Catalog for LOC105374852 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374852 Gene

Localization for LOC105374852 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374852 Gene

Pathways & Interactions for LOC105374852 Gene

SuperPathways for LOC105374852 Gene

No Data Available

Interacting Proteins for LOC105374852 Gene

Gene Ontology (GO) - Biological Process for LOC105374852 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374852 Gene

Drugs & Compounds for LOC105374852 Gene

No Compound Related Data Available

Transcripts for LOC105374852 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374852 Gene

No ASD Table

Relevant External Links for LOC105374852 Gene

GeneLoc Exon Structure for
LOC105374852

No data available for mRNA/cDNA for LOC105374852 Gene

Expression for LOC105374852 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374852 Gene

Orthologs for LOC105374852 Gene

No data available for Orthologs and Evolution for LOC105374852 Gene

Paralogs for LOC105374852 Gene

No data available for Paralogs for LOC105374852 Gene

Variants for LOC105374852 Gene

Sequence variations from dbSNP and Humsavar for LOC105374852 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000390396 -- 88,015,584(+) G/A/C upstream_transcript_variant
rs1000763125 -- 88,015,816(+) G/C upstream_transcript_variant
rs1001003406 -- 88,020,894(+) C/T non_coding_transcript_variant
rs1001594650 -- 88,017,651(+) G/A intron_variant
rs1002089661 -- 88,017,382(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374852 Gene

Disorders for LOC105374852 Gene

No disorders were found for LOC105374852 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374852 Gene

Publications for LOC105374852 Gene

No publications were found for LOC105374852 Gene.

Products for LOC105374852 Gene

Sources for LOC105374852 Gene

Content
Loading form....