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Aliases for LOC105374846 Gene

Subcategory (RNA class) for LOC105374846 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374846 Gene

  • Uncharacterized LOC105374846 3

External Ids for LOC105374846 Gene

Previous GeneCards Identifiers for LOC105374846 Gene

  • GC02U903332

Summaries for LOC105374846 Gene

GeneCards Summary for LOC105374846 Gene

LOC105374846 (Uncharacterized LOC105374846) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374846 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374846 Gene

Genomics for LOC105374846 Gene

GeneHancer (GH) Regulatory Elements for LOC105374846 Gene

Promoters and enhancers for LOC105374846 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J086805 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +12.6 12552 5.3 PKNOX1 CLOCK FOXA2 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZNF143 SP3 CD8A CD8B SNORD94 CHMP3 RNU6-640P REEP1 PLGLB1 LOC105374846
GH02J086783 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.9 -5865 12.6 PKNOX1 ATF1 ZSCAN4 FEZF1 ZNF335 ZNF366 SCRT2 ZNF143 ATF7 BCLAF1 CD8A CD8B CHMP3 RNU6-640P REEP1 ENSG00000231259 RMND5A KDM3A RNF103 LOC105374846
GH02J086764 Enhancer 0.8 ENCODE dbSUPER 0.3 -30.2 -30224 0.8 CTCF ZNF654 USF1 NR2F1 TRIM22 EBF1 RAD21 ATF2 MITF SMC3 CHMP3 RNU6-640P CD8A GC02M086689 LOC105374846 RMND5A
GH02J086747 Enhancer 0.7 ENCODE 0.2 -47.1 -47127 1.5 CEBPG BMI1 IRF9 ZNF335 ATF7 TRIM24 RFX1 SOX6 ZNF740 HLF RNF103-CHMP3 RNF103 CHMP3 RNU6-640P CD8A RMND5A IMMT GC02M086689 LOC105374846
GH02J086811 Enhancer 0.3 dbSUPER 0.4 +17.5 17519 3.5 ZSCAN4 CD8A LOC105374846 ANAPC1P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374846 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374846 Gene

Genomic Locations for LOC105374846 Gene
chr2:86,795,302-86,822,306
(GRCh38/hg38)
Size:
27,005 bases
Orientation:
Plus strand

Genomic View for LOC105374846 Gene

Genes around LOC105374846 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374846 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374846 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374846 Gene

Proteins for LOC105374846 Gene

Post-translational modifications for LOC105374846 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374846 Gene

Domains & Families for LOC105374846 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374846 Gene

Function for LOC105374846 Gene

Phenotypes From GWAS Catalog for LOC105374846 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374846 Gene

Localization for LOC105374846 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374846 Gene

Pathways & Interactions for LOC105374846 Gene

SuperPathways for LOC105374846 Gene

No Data Available

Interacting Proteins for LOC105374846 Gene

Gene Ontology (GO) - Biological Process for LOC105374846 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374846 Gene

Drugs & Compounds for LOC105374846 Gene

No Compound Related Data Available

Transcripts for LOC105374846 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374846 Gene

No ASD Table

Relevant External Links for LOC105374846 Gene

GeneLoc Exon Structure for
LOC105374846

No data available for mRNA/cDNA for LOC105374846 Gene

Expression for LOC105374846 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374846 Gene

Orthologs for LOC105374846 Gene

No data available for Orthologs and Evolution for LOC105374846 Gene

Paralogs for LOC105374846 Gene

No data available for Paralogs for LOC105374846 Gene

Variants for LOC105374846 Gene

Sequence variations from dbSNP and Humsavar for LOC105374846 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000105034 -- 86,802,769(+) C/A intron_variant
rs1000196443 -- 86,817,669(+) A/G genic_downstream_transcript_variant, intron_variant
rs1000311966 -- 86,808,742(+) C/G intron_variant
rs1000359308 -- 86,810,347(+) T/G intron_variant, non_coding_transcript_variant
rs1000375376 -- 86,816,018(+) T/A/C genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374846 Gene

Disorders for LOC105374846 Gene

No disorders were found for LOC105374846 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374846 Gene

Publications for LOC105374846 Gene

No publications were found for LOC105374846 Gene.

Products for LOC105374846 Gene

Sources for LOC105374846 Gene

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