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Aliases for LOC105374841 Gene

Subcategory (RNA class) for LOC105374841 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374841 Gene

  • Uncharacterized LOC105374841 3

External Ids for LOC105374841 Gene

Previous GeneCards Identifiers for LOC105374841 Gene

  • GC02U903759

Summaries for LOC105374841 Gene

GeneCards Summary for LOC105374841 Gene

LOC105374841 (Uncharacterized LOC105374841) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374841 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374841 Gene

Genomics for LOC105374841 Gene

GeneHancer (GH) Regulatory Elements for LOC105374841 Gene

Promoters and enhancers for LOC105374841 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J085412 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 650.7 0.0 -2 2.8 PKNOX1 FOXA2 MLX ARID4B SIN3A ZNF766 FOS ZNF263 SP5 REST CAPG LOC105374841 SNORD94 RETSAT ELMOD3 TGOLN2 VAMP8 ENSG00000273196 GC02P085363
GH02J085404 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.6 -5591 8 HDGF HDAC1 YY1 EGR1 RCOR1 IKZF2 RUNX3 EGR2 SMARCA5 ZNF362 CAPG RETSAT TGOLN2 KCMF1 LOC105374841 ENSG00000273196 GC02P085363
GH02J085395 Enhancer 0.9 ENCODE dbSUPER 0.4 -16.9 -16921 2.7 SOX13 CLOCK ESRRA NEUROD1 ERF CTBP1 ZNF316 GATA3 MAFK SMARCE1 CAPG RETSAT ENSG00000273196 LOC105374841 GC02P085363
GH02J085391 Enhancer 1 ENCODE dbSUPER 0.3 -22.6 -22559 0.2 HDGF RB1 ARID4B SIN3A ZNF48 RAD21 ZNF614 GLIS2 ARID2 PRPF4 SNORD94 C2orf68 ELMOD3 LOC100996506 USP39 ENSG00000273196 LOC105374841 GC02P085363
GH02J085392 Enhancer 1 ENCODE dbSUPER 0.3 -20.8 -20825 3.2 HDGF PKNOX1 RB1 NFIB ARID4B SIN3A KLF5 ZNF48 RAD21 ZNF614 CAPG SNORD94 C2orf68 ELMOD3 LOC100996506 USP39 ENSG00000273196 LOC105374841 GC02P085363
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374841 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374841 Gene

Genomic Locations for LOC105374841 Gene
chr2:85,413,992-85,416,576
(GRCh38/hg38)
Size:
2,585 bases
Orientation:
Plus strand

Genomic View for LOC105374841 Gene

Genes around LOC105374841 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374841 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374841 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374841 Gene

Proteins for LOC105374841 Gene

Post-translational modifications for LOC105374841 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374841 Gene

Domains & Families for LOC105374841 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374841 Gene

Function for LOC105374841 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374841 Gene

Localization for LOC105374841 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374841 Gene

Pathways & Interactions for LOC105374841 Gene

SuperPathways for LOC105374841 Gene

No Data Available

Interacting Proteins for LOC105374841 Gene

Gene Ontology (GO) - Biological Process for LOC105374841 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374841 Gene

Drugs & Compounds for LOC105374841 Gene

No Compound Related Data Available

Transcripts for LOC105374841 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374841 Gene

No ASD Table

Relevant External Links for LOC105374841 Gene

GeneLoc Exon Structure for
LOC105374841

No data available for mRNA/cDNA for LOC105374841 Gene

Expression for LOC105374841 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374841 Gene

Orthologs for LOC105374841 Gene

No data available for Orthologs and Evolution for LOC105374841 Gene

Paralogs for LOC105374841 Gene

No data available for Paralogs for LOC105374841 Gene

Variants for LOC105374841 Gene

Sequence variations from dbSNP and Humsavar for LOC105374841 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000123860 -- 85,412,532(+) AATAATAATA/AATAATA upstream_transcript_variant
rs1000724498 -- 85,413,952(+) C/T upstream_transcript_variant
rs1001061969 -- 85,414,436(+) T/C intron_variant
rs1001288105 -- 85,415,048(+) G/A intron_variant
rs1001402088 -- 85,415,380(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374841 Gene

Disorders for LOC105374841 Gene

No disorders were found for LOC105374841 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374841 Gene

Publications for LOC105374841 Gene

No publications were found for LOC105374841 Gene.

Products for LOC105374841 Gene

Sources for LOC105374841 Gene

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