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Aliases for LOC105374838 Gene

Subcategory (RNA class) for LOC105374838 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374838 Gene

  • Uncharacterized LOC105374838 3

External Ids for LOC105374838 Gene

Previous GeneCards Identifiers for LOC105374838 Gene

  • GC02U903237

Summaries for LOC105374838 Gene

GeneCards Summary for LOC105374838 Gene

LOC105374838 (Uncharacterized LOC105374838) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374838 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374838 Gene

Genomics for LOC105374838 Gene

GeneHancer (GH) Regulatory Elements for LOC105374838 Gene

Promoters and enhancers for LOC105374838 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I084923 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 550.8 -0.2 -230 4 MLX ZFP64 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 LOC105374838 USP39 KCMF1 RPS2P17
GH02I084918 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -6.2 -6189 3.3 PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 IRF4 FOS MAT2A TCF7L1 ELMOD3 KCMF1 TMSB10 RPS2P17 LOC105374838
GH02I084937 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +13.2 13232 3 HDGF PKNOX1 SMAD1 BATF KLF5 IRF4 GTF3C2 ATF7 ETV6 BCLAF1 KCMF1 TRABD2A LOC105374838 GC02M084928 GC02M084965
GH02I084944 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +20.0 20016 3.4 HDGF PKNOX1 SMAD1 MLX ZFP64 ARID4B SIN3A DMAP1 IRF4 ZNF48 TMSB10 GC02M084928 GC02M084965 LOC105374838
GH02I084942 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +17.0 17019 1.4 SMAD1 EBF1 BMI1 BATF IRF4 RELA POLR2A NFATC1 ATF7 ETV6 GC02M084928 LOC105374838 GC02M084965
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374838 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374838 Gene

Genomic Locations for LOC105374838 Gene
chr2:84,926,031-84,964,294
(GRCh38/hg38)
Size:
38,264 bases
Orientation:
Plus strand

Genomic View for LOC105374838 Gene

Genes around LOC105374838 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374838 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374838 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374838 Gene

Proteins for LOC105374838 Gene

Post-translational modifications for LOC105374838 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374838 Gene

Domains & Families for LOC105374838 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374838 Gene

Function for LOC105374838 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374838 Gene

Localization for LOC105374838 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374838 Gene

Pathways & Interactions for LOC105374838 Gene

SuperPathways for LOC105374838 Gene

No Data Available

Interacting Proteins for LOC105374838 Gene

Gene Ontology (GO) - Biological Process for LOC105374838 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374838 Gene

Drugs & Compounds for LOC105374838 Gene

No Compound Related Data Available

Transcripts for LOC105374838 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374838 Gene

No ASD Table

Relevant External Links for LOC105374838 Gene

GeneLoc Exon Structure for
LOC105374838

No data available for mRNA/cDNA for LOC105374838 Gene

Expression for LOC105374838 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374838 Gene

Orthologs for LOC105374838 Gene

No data available for Orthologs and Evolution for LOC105374838 Gene

Paralogs for LOC105374838 Gene

No data available for Paralogs for LOC105374838 Gene

Variants for LOC105374838 Gene

Sequence variations from dbSNP and Humsavar for LOC105374838 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000133313 -- 84,959,842(+) C/T genic_upstream_transcript_variant, intron_variant
rs1000175127 -- 84,940,933(+) C/G genic_upstream_transcript_variant, intron_variant
rs1000206152 -- 84,941,226(+) G/C genic_upstream_transcript_variant, non_coding_transcript_variant
rs1000237275 -- 84,933,085(+) C/T genic_upstream_transcript_variant, intron_variant
rs1000282283 -- 84,934,825(+) C/A/T genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374838 Gene

Disorders for LOC105374838 Gene

No disorders were found for LOC105374838 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374838 Gene

Publications for LOC105374838 Gene

No publications were found for LOC105374838 Gene.

Products for LOC105374838 Gene

Sources for LOC105374838 Gene

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