Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105374837 Gene

Subcategory (RNA class) for LOC105374837 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374837 Gene

  • Uncharacterized LOC105374837 3

External Ids for LOC105374837 Gene

Previous GeneCards Identifiers for LOC105374837 Gene

  • GC02U903415

Summaries for LOC105374837 Gene

GeneCards Summary for LOC105374837 Gene

LOC105374837 (Uncharacterized LOC105374837) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374837 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374837 Gene

Genomics for LOC105374837 Gene

GeneHancer (GH) Regulatory Elements for LOC105374837 Gene

Promoters and enhancers for LOC105374837 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I084887 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +0.1 106 3.2 PKNOX1 FOXA2 YBX1 ZBTB40 BATF IRF4 ATF7 ETV6 IKZF2 RUNX3 LOC105374837 RPS2P17 TRABD2A TMSB10 GC02P084898
GH02I084878 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 0.4 -8.2 -8228 4.2 PKNOX1 ARID4B SIN3A ZNF2 IRF4 BRCA1 ZNF48 ZNF121 ZNF143 RUNX3 TRABD2A GC02P084874 LOC105374837
GH02I084897 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +9.8 9778 3.2 PKNOX1 SMAD1 BATF ZNF335 ZNF766 ATF7 IKZF2 RUNX3 JUNB ELF1 GC02P084898 TRABD2A LOC105374837
GH02I084893 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +6.0 5967 1.9 SMARCE1 ZNF217 JUND RFX1 POLR2A EBF1 SPI1 TRABD2A GC02P084898 LOC105374837
GH02I084873 Enhancer 0.5 dbSUPER 0.4 -14.1 -14085 1.8 ZNF121 CREB1 ATF7 ATF2 ZNF623 RPL12P18 GC02P084874 TRABD2A RPS2P17 LOC105374837
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374837 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374837 Gene

Genomic Locations for LOC105374837 Gene
chr2:84,888,975-84,902,938
(GRCh38/hg38)
Size:
13,964 bases
Orientation:
Plus strand

Genomic View for LOC105374837 Gene

Genes around LOC105374837 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374837 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374837 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374837 Gene

Proteins for LOC105374837 Gene

Post-translational modifications for LOC105374837 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374837 Gene

Domains & Families for LOC105374837 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374837 Gene

Function for LOC105374837 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374837 Gene

Localization for LOC105374837 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374837 Gene

Pathways & Interactions for LOC105374837 Gene

SuperPathways for LOC105374837 Gene

No Data Available

Interacting Proteins for LOC105374837 Gene

Gene Ontology (GO) - Biological Process for LOC105374837 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374837 Gene

Drugs & Compounds for LOC105374837 Gene

No Compound Related Data Available

Transcripts for LOC105374837 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374837 Gene

No ASD Table

Relevant External Links for LOC105374837 Gene

GeneLoc Exon Structure for
LOC105374837

No data available for mRNA/cDNA for LOC105374837 Gene

Expression for LOC105374837 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374837 Gene

Orthologs for LOC105374837 Gene

No data available for Orthologs and Evolution for LOC105374837 Gene

Paralogs for LOC105374837 Gene

No data available for Paralogs for LOC105374837 Gene

Variants for LOC105374837 Gene

Sequence variations from dbSNP and Humsavar for LOC105374837 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000632024 -- 84,891,121(+) T/G intron_variant
rs1000733664 -- 84,896,738(+) A/C intron_variant
rs1000956232 -- 84,903,062(+) G/C/T downstream_transcript_variant
rs1001596658 -- 84,899,476(+) T/C intron_variant
rs1001635104 -- 84,890,530(+) C/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374837 Gene

Disorders for LOC105374837 Gene

No disorders were found for LOC105374837 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374837 Gene

Publications for LOC105374837 Gene

No publications were found for LOC105374837 Gene.

Products for LOC105374837 Gene

Sources for LOC105374837 Gene

Content
Loading form....