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Aliases for LOC105374824 Gene

Subcategory (RNA class) for LOC105374824 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374824 Gene

  • Uncharacterized LOC105374824 3

External Ids for LOC105374824 Gene

Previous GeneCards Identifiers for LOC105374824 Gene

  • GC02U903867

Summaries for LOC105374824 Gene

GeneCards Summary for LOC105374824 Gene

LOC105374824 (Uncharacterized LOC105374824) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374824 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374824 Gene

Genomics for LOC105374824 Gene

GeneHancer (GH) Regulatory Elements for LOC105374824 Gene

Promoters and enhancers for LOC105374824 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J080361 Enhancer 0.7 ENCODE 650.7 +2.0 1958 0.1 MEIS2 TEAD4 TAL1 BRCA1 TCF12 CTBP1 BRD9 NCOR1 CBFA2T2 TRIM24 LOC105374824 LRRTM1 GC02P080062
GH02J080305 Promoter 0.5 EPDnew 0.2 +58.9 58920 0.1 LRRTM1 LOC105374824 GC02P080062
GH02J080421 Enhancer 0.2 FANTOM5 0.2 -57.3 -57304 0.3 LOC105374824 ENSG00000237031
GH02J080495 Enhancer 0.4 ENCODE 0.1 -132.8 -132822 1.7 JUND POLR2A FOS ENSG00000237031 LOC105374824
GH02J080555 Enhancer 0.2 ENCODE 0.1 -193.0 -192965 2.5 ENSG00000237031 LOC105374824
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374824 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374824 Gene

Genomic Locations for LOC105374824 Gene
chr2:80,343,396-80,364,019
(GRCh38/hg38)
Size:
20,624 bases
Orientation:
Minus strand

Genomic View for LOC105374824 Gene

Genes around LOC105374824 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374824 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374824 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374824 Gene

Proteins for LOC105374824 Gene

Post-translational modifications for LOC105374824 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374824 Gene

Domains & Families for LOC105374824 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374824 Gene

Function for LOC105374824 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374824 Gene

Localization for LOC105374824 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374824 Gene

Pathways & Interactions for LOC105374824 Gene

SuperPathways for LOC105374824 Gene

No Data Available

Interacting Proteins for LOC105374824 Gene

Gene Ontology (GO) - Biological Process for LOC105374824 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374824 Gene

Drugs & Compounds for LOC105374824 Gene

No Compound Related Data Available

Transcripts for LOC105374824 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374824 Gene

No ASD Table

Relevant External Links for LOC105374824 Gene

GeneLoc Exon Structure for
LOC105374824

No data available for mRNA/cDNA for LOC105374824 Gene

Expression for LOC105374824 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374824 Gene

Orthologs for LOC105374824 Gene

No data available for Orthologs and Evolution for LOC105374824 Gene

Paralogs for LOC105374824 Gene

No data available for Paralogs for LOC105374824 Gene

Variants for LOC105374824 Gene

Sequence variations from dbSNP and Humsavar for LOC105374824 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000244636 -- 80,353,378(-) A/G intron_variant
rs1000294414 -- 80,359,295(-) A/G intron_variant
rs1000334908 -- 80,342,604(-) A/C downstream_transcript_variant
rs1000455856 -- 80,353,444(-) C/A intron_variant
rs1000581712 -- 80,359,998(-) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374824 Gene

Disorders for LOC105374824 Gene

No disorders were found for LOC105374824 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374824 Gene

Publications for LOC105374824 Gene

No publications were found for LOC105374824 Gene.

Products for LOC105374824 Gene

Sources for LOC105374824 Gene

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