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Aliases for LOC105374806 Gene

Subcategory (RNA class) for LOC105374806 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374806 Gene

  • Uncharacterized LOC105374806 3

External Ids for LOC105374806 Gene

Previous GeneCards Identifiers for LOC105374806 Gene

  • GC02U903405

Summaries for LOC105374806 Gene

GeneCards Summary for LOC105374806 Gene

LOC105374806 (Uncharacterized LOC105374806) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374806 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374806 Gene

Genomics for LOC105374806 Gene

GeneHancer (GH) Regulatory Elements for LOC105374806 Gene

Promoters and enhancers for LOC105374806 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I073859 Enhancer 0.6 ENCODE 550.8 -1.9 -1891 0.2 JUN NR2F1 FOSL1 CTBP1 JUND MTA1 FOS FOSL2 NR2F6 LOC105374806 LOC100420774 STAMBP
GH02I073857 Enhancer 0.3 FANTOM5 550.8 +1.0 991 0.2 LOC105374806 SLC4A5 ALMS1 LOC105374807 STAMBP
GH02I073856 Enhancer 0.3 ENCODE 550.8 +1.6 1649 0.2 FOS LOC105374806 LOC105374807 STAMBP
GH02I073869 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -12.5 -12450 1.4 NFE2 PRDM1 ACTG2 DGUOK BOLA3 BOLA3-AS1 STAMBP HTRA2 LOC100420774 LOC105374806
GH02I073841 Enhancer 0.8 ENCODE dbSUPER 0.4 +15.5 15543 2 GATAD2A FOXA2 TEAD1 FOXA3 TAL1 FOXA1 TEAD3 HNF1A CEBPA SMAD4 ACTG2 TET3 BOLA3 BOLA3-AS1 LOC107985899 SLC4A5 STAMBP ALMS1P1 LOC105374807 LOC105374806
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374806 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374806 Gene

Genomic Locations for LOC105374806 Gene
chr2:73,844,799-73,858,028
(GRCh38/hg38)
Size:
13,230 bases
Orientation:
Minus strand

Genomic View for LOC105374806 Gene

Genes around LOC105374806 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374806 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374806 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374806 Gene

Proteins for LOC105374806 Gene

Post-translational modifications for LOC105374806 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374806 Gene

Domains & Families for LOC105374806 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374806 Gene

Function for LOC105374806 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374806 Gene

Localization for LOC105374806 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374806 Gene

Pathways & Interactions for LOC105374806 Gene

SuperPathways for LOC105374806 Gene

No Data Available

Interacting Proteins for LOC105374806 Gene

Gene Ontology (GO) - Biological Process for LOC105374806 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374806 Gene

Drugs & Compounds for LOC105374806 Gene

No Compound Related Data Available

Transcripts for LOC105374806 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374806 Gene

No ASD Table

Relevant External Links for LOC105374806 Gene

GeneLoc Exon Structure for
LOC105374806

No data available for mRNA/cDNA for LOC105374806 Gene

Expression for LOC105374806 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374806 Gene

Orthologs for LOC105374806 Gene

No data available for Orthologs and Evolution for LOC105374806 Gene

Paralogs for LOC105374806 Gene

No data available for Paralogs for LOC105374806 Gene

Variants for LOC105374806 Gene

Sequence variations from dbSNP and Humsavar for LOC105374806 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs140651555 uncertain-significance, Microcephaly-capillary malformation syndrome 73,847,510(-) G/A intron_variant
rs397509388 pathogenic, Microcephaly-capillary malformation syndrome 73,847,543(-) C/T intron_variant
rs397509389 pathogenic, likely-pathogenic, Microcephaly-capillary malformation syndrome, not provided 73,844,893(-) G/T intron_variant
rs397514697 pathogenic, Microcephaly-capillary malformation syndrome 73,845,186(-) T/A intron_variant
rs886037633 pathogenic, Microcephaly-capillary malformation syndrome 73,847,421(-) CC/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374806 Gene

Disorders for LOC105374806 Gene

No disorders were found for LOC105374806 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374806 Gene

Publications for LOC105374806 Gene

No publications were found for LOC105374806 Gene.

Products for LOC105374806 Gene

Sources for LOC105374806 Gene

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