Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105374793 Gene

Subcategory (RNA class) for LOC105374793 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374793 Gene

  • Uncharacterized LOC105374793 3
  • AC022201.1 5

External Ids for LOC105374793 Gene

Previous GeneCards Identifiers for LOC105374793 Gene

  • GC02U903384

Summaries for LOC105374793 Gene

GeneCards Summary for LOC105374793 Gene

LOC105374793 (Uncharacterized LOC105374793) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374793 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374793 Gene

Genomics for LOC105374793 Gene

GeneHancer (GH) Regulatory Elements for LOC105374793 Gene

Promoters and enhancers for LOC105374793 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J070403 Enhancer 0.7 ENCODE 650.7 +0.8 836 1.2 TFAP4 NFIB GATA3 CTBP1 LCORL ZNF316 MTA3 ZBTB48 SCRT2 NFE2 GC02M070401 LOC105374793 TGFA
GH02J070380 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 0.3 -20.9 -20893 3 NCOA3 MAX ELF1 ZBTB40 GABPA JUND GATA3 POLR2A HSF1 FOS TGFA TEX261 ANKRD53 LOC105374793 BRD7P6
GH02J070387 Enhancer 0.7 ENCODE dbSUPER 0.4 -14.8 -14817 2.4 JUND SCRT2 CREB1 ATF7 ATF2 TGFA LOC105374793 BRD7P6
GH02J070370 Enhancer 0.8 ENCODE dbSUPER 0.3 -31.1 -31082 2.4 RFX1 JUN ZNF10 MAX CEBPB CEBPG EP300 GABPA RFX5 GABPB1 TGFA ADD2 BRD7P6 LOC105374793
GH02J070361 Enhancer 0.7 ENCODE dbSUPER 0.3 -41.8 -41810 0.2 PKNOX1 USF1 NFYA NFYB USF2 BRD7P6 LOC105374793
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374793 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374793 Gene

Genomic Locations for LOC105374793 Gene
chr2:70,402,934-70,441,467
(GRCh38/hg38)
Size:
38,534 bases
Orientation:
Plus strand
chr2:70,630,066-70,649,810
(GRCh37/hg19)
Size:
19,745 bases
Orientation:
Plus strand

Genomic View for LOC105374793 Gene

Genes around LOC105374793 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374793 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374793 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for LOC105374793 Gene

Proteins for LOC105374793 Gene

Post-translational modifications for LOC105374793 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374793 Gene

Domains & Families for LOC105374793 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374793 Gene

Function for LOC105374793 Gene

Phenotypes From GWAS Catalog for LOC105374793 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374793 Gene

Localization for LOC105374793 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374793 Gene

Pathways & Interactions for LOC105374793 Gene

SuperPathways for LOC105374793 Gene

No Data Available

Interacting Proteins for LOC105374793 Gene

Gene Ontology (GO) - Biological Process for LOC105374793 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374793 Gene

Drugs & Compounds for LOC105374793 Gene

No Compound Related Data Available

Transcripts for LOC105374793 Gene

mRNA/cDNA for LOC105374793 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374793 Gene

No ASD Table

Relevant External Links for LOC105374793 Gene

GeneLoc Exon Structure for
LOC105374793

Expression for LOC105374793 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374793 Gene

Orthologs for LOC105374793 Gene

Evolution for LOC105374793 Gene

ENSEMBL:
Gene Tree for LOC105374793 (if available)
TreeFam:
Gene Tree for LOC105374793 (if available)

No data available for Orthologs for LOC105374793 Gene

Paralogs for LOC105374793 Gene

No data available for Paralogs for LOC105374793 Gene

Variants for LOC105374793 Gene

Sequence variations from dbSNP and Humsavar for LOC105374793 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000040960 -- 70,414,763(+) A/G genic_upstream_transcript_variant, intron_variant
rs1000193403 -- 70,409,233(+) A/G genic_upstream_transcript_variant, intron_variant
rs1000220322 -- 70,418,543(+) T/C genic_upstream_transcript_variant, intron_variant
rs1000264871 -- 70,427,833(+) T/A genic_upstream_transcript_variant, intron_variant
rs1000266584 -- 70,406,531(+) C/T genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374793 Gene

Disorders for LOC105374793 Gene

No disorders were found for LOC105374793 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374793 Gene

Publications for LOC105374793 Gene

No publications were found for LOC105374793 Gene.

Products for LOC105374793 Gene

Sources for LOC105374793 Gene

Content
Loading form....