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Aliases for LOC105374779 Gene

Subcategory (RNA class) for LOC105374779 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374779 Gene

  • Uncharacterized LOC105374779 3

External Ids for LOC105374779 Gene

Previous GeneCards Identifiers for LOC105374779 Gene

  • GC02U903526

Summaries for LOC105374779 Gene

GeneCards Summary for LOC105374779 Gene

LOC105374779 (Uncharacterized LOC105374779) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374779 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374779 Gene

Genomics for LOC105374779 Gene

GeneHancer (GH) Regulatory Elements for LOC105374779 Gene

Promoters and enhancers for LOC105374779 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I065081 Enhancer 1 ENCODE dbSUPER 550.8 +0.5 509 1.9 HDAC1 ATF1 PKNOX1 TAF9B RAD21 TCF12 PAF1 RXRA CEBPB REST LOC105374779 CEP68 RAB1A LINC02576
GH02I065054 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 0.3 +25.1 25101 5.1 HDGF PKNOX1 FOXA2 SMAD1 MLX ARNT ZFP64 ARID4B SIN3A FEZF1 CEP68 LOC105374778 RAB1A RNU6-548P ACTR2 LOC105374779
GH02I065060 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +19.0 19011 5.8 HDGF PKNOX1 ATF1 FOXA2 SIN3A FEZF1 IRF4 TCF12 ZNF121 ZNF766 CEP68 RAB1A RNU6-548P ACTR2 LOC105374779
GH02I065075 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +6.4 6387 1.8 MEIS2 PKNOX1 ATF1 SAP130 TEAD4 TAL1 RAD21 TCF12 POLR2A NCOR1 CEP68 RAB1A LINC02576 ACTR2 SERTAD2 SLC1A4 LOC105374779
GH02I065068 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +12.6 12578 3.8 CTCF USF1 ARID4B RAD21 TEAD3 JUND TCF7 PRDM10 NR2F6 ZNF600 CEP68 RAB1A RN7SL211P LOC105374779
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374779 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374779 Gene

Genomic Locations for LOC105374779 Gene
chr2:65,070,701-65,082,529
(GRCh38/hg38)
Size:
11,829 bases
Orientation:
Minus strand

Genomic View for LOC105374779 Gene

Genes around LOC105374779 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374779 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374779 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374779 Gene

Proteins for LOC105374779 Gene

Post-translational modifications for LOC105374779 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374779 Gene

Domains & Families for LOC105374779 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374779 Gene

Function for LOC105374779 Gene

Phenotypes From GWAS Catalog for LOC105374779 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374779 Gene

Localization for LOC105374779 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374779 Gene

Pathways & Interactions for LOC105374779 Gene

SuperPathways for LOC105374779 Gene

No Data Available

Interacting Proteins for LOC105374779 Gene

Gene Ontology (GO) - Biological Process for LOC105374779 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374779 Gene

Drugs & Compounds for LOC105374779 Gene

No Compound Related Data Available

Transcripts for LOC105374779 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374779 Gene

No ASD Table

Relevant External Links for LOC105374779 Gene

GeneLoc Exon Structure for
LOC105374779

No data available for mRNA/cDNA for LOC105374779 Gene

Expression for LOC105374779 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374779 Gene

Orthologs for LOC105374779 Gene

No data available for Orthologs and Evolution for LOC105374779 Gene

Paralogs for LOC105374779 Gene

No data available for Paralogs for LOC105374779 Gene

Variants for LOC105374779 Gene

Sequence variations from dbSNP and Humsavar for LOC105374779 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000710044 -- 65,081,311(-) C/G intron_variant
rs1000906094 -- 65,078,627(-) T/C intron_variant
rs1001220500 -- 65,075,851(-) A/G intron_variant
rs1001377159 -- 65,084,094(-) TTT/TTTT upstream_transcript_variant
rs1002310351 -- 65,079,172(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374779 Gene

Disorders for LOC105374779 Gene

No disorders were found for LOC105374779 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374779 Gene

Publications for LOC105374779 Gene

No publications were found for LOC105374779 Gene.

Products for LOC105374779 Gene

Sources for LOC105374779 Gene

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