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Aliases for LOC105374772 Gene

Subcategory (RNA class) for LOC105374772 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374772 Gene

  • Uncharacterized LOC105374772 3

External Ids for LOC105374772 Gene

Previous GeneCards Identifiers for LOC105374772 Gene

  • GC02U903797

Summaries for LOC105374772 Gene

GeneCards Summary for LOC105374772 Gene

LOC105374772 (Uncharacterized LOC105374772) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374772 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374772 Gene

Genomics for LOC105374772 Gene

GeneHancer (GH) Regulatory Elements for LOC105374772 Gene

Promoters and enhancers for LOC105374772 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I064604 Enhancer 1.2 ENCODE dbSUPER 550.8 +0.4 404 3.7 HDGF CLOCK ATF1 FOXA2 ARNT ARID4B DMAP1 IRF4 ZNF48 POLR2B LINC02579 LOC105374772 LOC100507006 RNU6-100P
GH02I064608 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.8 -2.2 -2245 1.2 HDGF SMAD1 RB1 SIN3A ZBTB40 ELK1 EGR1 ZNF143 ATF7 SMARCA5 SERTAD2 PELI1 AFTPH SLC1A4 LINC02579 LOC105374772 PIR42187
GH02I064593 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +12.6 12630 1.3 JUNB ZMYM3 BATF AFTPH SERTAD2 LINC02576 RNU6-548P PELI1 SLC1A4 LINC02579 LOC105374772 RNU6-100P
GH02I064586 Enhancer 0.8 Ensembl ENCODE 0.4 +19.9 19914 0.7 CTCF ZNF654 TRIM22 MAFG REST RAD21 TARDBP SMC3 ZNF143 ZNF24 SERTAD2 LINC02576 AFTPH RNU6-100P LOC105374772 LINC02579
GH02I064622 Enhancer 0.7 ENCODE dbSUPER 0.4 -15.4 -15387 0.2 CTCF TEAD1 ZIC2 RAD21 TEAD3 SERTAD2 PIR42187 LOC105374772
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374772 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374772 Gene

Genomic Locations for LOC105374772 Gene
chr2:64,581,257-64,607,175
(GRCh38/hg38)
Size:
25,919 bases
Orientation:
Minus strand

Genomic View for LOC105374772 Gene

Genes around LOC105374772 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374772 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374772 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374772 Gene

Proteins for LOC105374772 Gene

Post-translational modifications for LOC105374772 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374772 Gene

Domains & Families for LOC105374772 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374772 Gene

Function for LOC105374772 Gene

Phenotypes From GWAS Catalog for LOC105374772 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374772 Gene

Localization for LOC105374772 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374772 Gene

Pathways & Interactions for LOC105374772 Gene

SuperPathways for LOC105374772 Gene

No Data Available

Interacting Proteins for LOC105374772 Gene

Gene Ontology (GO) - Biological Process for LOC105374772 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374772 Gene

Drugs & Compounds for LOC105374772 Gene

No Compound Related Data Available

Transcripts for LOC105374772 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374772 Gene

No ASD Table

Relevant External Links for LOC105374772 Gene

GeneLoc Exon Structure for
LOC105374772

No data available for mRNA/cDNA for LOC105374772 Gene

Expression for LOC105374772 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374772 Gene

Orthologs for LOC105374772 Gene

No data available for Orthologs and Evolution for LOC105374772 Gene

Paralogs for LOC105374772 Gene

No data available for Paralogs for LOC105374772 Gene

Variants for LOC105374772 Gene

Sequence variations from dbSNP and Humsavar for LOC105374772 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000293784 -- 64,604,050(-) C/T intron_variant
rs1000351309 -- 64,581,713(-) T/C intron_variant
rs1000684027 -- 64,605,958(-) C/A intron_variant
rs1000714403 -- 64,583,240(-) G/A intron_variant
rs1000741777 -- 64,599,950(-) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374772 Gene

Disorders for LOC105374772 Gene

No disorders were found for LOC105374772 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374772 Gene

Publications for LOC105374772 Gene

No publications were found for LOC105374772 Gene.

Products for LOC105374772 Gene

Sources for LOC105374772 Gene

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