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Aliases for LOC105374771 Gene

Subcategory (RNA class) for LOC105374771 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105374771 Gene

  • Uncharacterized LOC105374771 3
  • AC008074.1 5

External Ids for LOC105374771 Gene

Previous GeneCards Identifiers for LOC105374771 Gene

  • GC02U903799

Summaries for LOC105374771 Gene

GeneCards Summary for LOC105374771 Gene

LOC105374771 (Uncharacterized LOC105374771) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374771 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374771 Gene

Genomics for LOC105374771 Gene

GeneHancer (GH) Regulatory Elements for LOC105374771 Gene

Promoters and enhancers for LOC105374771 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I064452 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 555.1 -0.2 -238 3.5 FOXA2 ARID4B SIN3A DMAP1 ZNF48 ETS1 GLIS2 FOS SP3 SREBF1 LOC105374771 LGALSL LINC01805
GH02I064210 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 9.8 +240.8 240818 5.4 HDGF PKNOX1 ATF1 IRF4 YY1 TCF12 ZNF766 ZNF207 ATF7 RUNX3 PELI1 LOC100507006 LGALSL LOC105374771 ENSG00000237217 SERTAD2 AFTPH ENSG00000270354 GC02M064246
GH02I064402 Enhancer 1.3 Ensembl ENCODE dbSUPER 10.8 +48.7 48655 4.9 ELF3 FOXA2 PKNOX1 ARID4B SIN3A BMI1 BATF THRB ZNF48 RAD21 ENSG00000237217 LOC105374771 LGALSL GC02P064397
GH02I064325 Enhancer 1.3 FANTOM5 Ensembl ENCODE 10.8 +126.8 126831 3.6 HDGF PKNOX1 SMAD1 RB1 BMI1 BATF KLF5 IRF4 RAD21 ZNF207 ENSG00000238012 LGALSL LOC105374771 ENSG00000237217 PELI1 ENSG00000238201 AFTPH SERTAD2 LOC105374768 GC02M064246
GH02I064390 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 10.9 +61.1 61069 4.6 HDAC1 ATF1 TEAD4 JUN MAX RAD21 YY1 FOSL1 HNF4G ATF7 LGALSL ENSG00000237217 LOC105374771 AFTPH ENSG00000238012 GC02P064397 RPL23AP37
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374771 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374771 Gene

Genomic Locations for LOC105374771 Gene
chr2:64,395,220-64,453,798
(GRCh38/hg38)
Size:
58,579 bases
Orientation:
Minus strand
chr2:64,622,354-64,680,932
(GRCh37/hg19)

Genomic View for LOC105374771 Gene

Genes around LOC105374771 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374771 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374771 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374771 Gene

Proteins for LOC105374771 Gene

Post-translational modifications for LOC105374771 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374771 Gene

Domains & Families for LOC105374771 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374771 Gene

Function for LOC105374771 Gene

Phenotypes From GWAS Catalog for LOC105374771 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374771 Gene

Localization for LOC105374771 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374771 Gene

Pathways & Interactions for LOC105374771 Gene

SuperPathways for LOC105374771 Gene

No Data Available

Interacting Proteins for LOC105374771 Gene

Gene Ontology (GO) - Biological Process for LOC105374771 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374771 Gene

Drugs & Compounds for LOC105374771 Gene

No Compound Related Data Available

Transcripts for LOC105374771 Gene

mRNA/cDNA for LOC105374771 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374771 Gene

No ASD Table

Relevant External Links for LOC105374771 Gene

GeneLoc Exon Structure for
LOC105374771

Expression for LOC105374771 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374771 Gene

Orthologs for LOC105374771 Gene

Evolution for LOC105374771 Gene

ENSEMBL:
Gene Tree for LOC105374771 (if available)
TreeFam:
Gene Tree for LOC105374771 (if available)

No data available for Orthologs for LOC105374771 Gene

Paralogs for LOC105374771 Gene

No data available for Paralogs for LOC105374771 Gene

Variants for LOC105374771 Gene

Sequence variations from dbSNP and Humsavar for LOC105374771 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000416968 -- 64,399,199(-) A/T intron_variant
rs1000530783 -- 64,395,117(-) G/A/T non_coding_transcript_variant
rs1000542116 -- 64,394,719(-) T/C non_coding_transcript_variant
rs1000593941 -- 64,394,706(-) G/T non_coding_transcript_variant
rs1000639241 -- 64,406,756(-) T/C genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374771 Gene

Disorders for LOC105374771 Gene

No disorders were found for LOC105374771 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374771 Gene

Publications for LOC105374771 Gene

No publications were found for LOC105374771 Gene.

Products for LOC105374771 Gene

Sources for LOC105374771 Gene

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