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Aliases for LOC105374754 Gene

Subcategory (RNA class) for LOC105374754 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105374754 Gene

  • Uncharacterized LOC105374754 3
  • AC007179.2 5

External Ids for LOC105374754 Gene

Previous GeneCards Identifiers for LOC105374754 Gene

  • GC02U903686

Summaries for LOC105374754 Gene

GeneCards Summary for LOC105374754 Gene

LOC105374754 (Uncharacterized LOC105374754) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374754 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374754 Gene

Genomics for LOC105374754 Gene

GeneHancer (GH) Regulatory Elements for LOC105374754 Gene

Promoters and enhancers for LOC105374754 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I059720 Enhancer 0.6 VISTA UCNEbase 0.4 +12.7 12748 1 LOC105374754 RNA5SP94 ENSG00000271955
GH02I059771 Enhancer 0.6 VISTA UCNEbase 0.3 -38.5 -38466 1.3 LOC105374754 GC02P059892 ENSG00000271955
GH02I059667 Enhancer 0.8 VISTA UCNEbase 0.2 +63.6 63645 4.2 PKNOX1 ATF2 GC02P059668 RNU6-508P RNA5SP94 LOC105374754 ENSG00000271955
GH02I059661 Enhancer 0.8 VISTA UCNEbase 0.2 +70.4 70443 2.8 HLF POU5F1 GC02P059668 RNU6-508P LOC105374754 ENSG00000271955
GH02I059778 Enhancer 0.6 VISTA UCNEbase 0.2 -46.0 -46007 2 LOC105374754 GC02P059892 ENSG00000271955
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374754 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374754 Gene

Genomic Locations for LOC105374754 Gene
chr2:59,238,394-59,733,396
(GRCh38/hg38)
Size:
495,003 bases
Orientation:
Minus strand
chr2:59,465,851-59,960,531
(GRCh37/hg19)

Genomic View for LOC105374754 Gene

Genes around LOC105374754 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374754 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374754 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374754 Gene

Proteins for LOC105374754 Gene

Post-translational modifications for LOC105374754 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374754 Gene

Domains & Families for LOC105374754 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374754 Gene

Function for LOC105374754 Gene

Phenotypes From GWAS Catalog for LOC105374754 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374754 Gene

Localization for LOC105374754 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374754 Gene

Pathways & Interactions for LOC105374754 Gene

SuperPathways for LOC105374754 Gene

No Data Available

Interacting Proteins for LOC105374754 Gene

Gene Ontology (GO) - Biological Process for LOC105374754 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374754 Gene

Drugs & Compounds for LOC105374754 Gene

No Compound Related Data Available

Transcripts for LOC105374754 Gene

mRNA/cDNA for LOC105374754 Gene

(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374754 Gene

No ASD Table

Relevant External Links for LOC105374754 Gene

GeneLoc Exon Structure for
LOC105374754

Expression for LOC105374754 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374754 Gene

Orthologs for LOC105374754 Gene

Evolution for LOC105374754 Gene

ENSEMBL:
Gene Tree for LOC105374754 (if available)
TreeFam:
Gene Tree for LOC105374754 (if available)

No data available for Orthologs for LOC105374754 Gene

Paralogs for LOC105374754 Gene

No data available for Paralogs for LOC105374754 Gene

Variants for LOC105374754 Gene

Sequence variations from dbSNP and Humsavar for LOC105374754 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000012442 -- 59,389,847(-) G/C upstream_transcript_variant
rs1000017534 -- 59,379,251(-) C/T genic_upstream_transcript_variant, intron_variant
rs1000024779 -- 59,355,118(-) G/A genic_upstream_transcript_variant, intron_variant
rs1000028279 -- 59,246,940(-) A/G genic_upstream_transcript_variant, intron_variant
rs1000028638 -- 59,322,294(-) G/A genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374754 Gene

Disorders for LOC105374754 Gene

No disorders were found for LOC105374754 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374754 Gene

Publications for LOC105374754 Gene

No publications were found for LOC105374754 Gene.

Products for LOC105374754 Gene

Sources for LOC105374754 Gene

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