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Aliases for LOC105374748 Gene

Subcategory (RNA class) for LOC105374748 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105374748 Gene

  • Uncharacterized LOC105374748 3
  • CTD-2035E11.3 3
  • CTD-2035E11.4 3
  • AC025171.3 5

External Ids for LOC105374748 Gene

Previous GeneCards Identifiers for LOC105374748 Gene

  • GC05U902591

Summaries for LOC105374748 Gene

GeneCards Summary for LOC105374748 Gene

LOC105374748 (Uncharacterized LOC105374748) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374748 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374748 Gene

Genomics for LOC105374748 Gene

GeneHancer (GH) Regulatory Elements for LOC105374748 Gene

Promoters and enhancers for LOC105374748 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I043015 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +0.5 521 6.6 PKNOX1 SMAD1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 IRF4 YY1 GC05M043024 LOC105374748 PIR45210 ANXA2R ZNF131 TMEM267 LOC153684 ENSG00000248240 ENSG00000249492 ENSG00000271788
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374748 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374748 Gene

Genomic Locations for LOC105374748 Gene
chr5:43,018,429-43,024,247
(GRCh38/hg38)
Size:
5,819 bases
Orientation:
Plus strand
chr5:43,018,531-43,024,349
(GRCh37/hg19)

Genomic View for LOC105374748 Gene

Genes around LOC105374748 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374748 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374748 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374748 Gene

Proteins for LOC105374748 Gene

Post-translational modifications for LOC105374748 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374748 Gene

Domains & Families for LOC105374748 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374748 Gene

Function for LOC105374748 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374748 Gene

Localization for LOC105374748 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374748 Gene

Pathways & Interactions for LOC105374748 Gene

SuperPathways for LOC105374748 Gene

No Data Available

Interacting Proteins for LOC105374748 Gene

Gene Ontology (GO) - Biological Process for LOC105374748 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374748 Gene

Drugs & Compounds for LOC105374748 Gene

No Compound Related Data Available

Transcripts for LOC105374748 Gene

mRNA/cDNA for LOC105374748 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374748 Gene

No ASD Table

Relevant External Links for LOC105374748 Gene

GeneLoc Exon Structure for
LOC105374748

Expression for LOC105374748 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374748 Gene

Orthologs for LOC105374748 Gene

Evolution for LOC105374748 Gene

ENSEMBL:
Gene Tree for LOC105374748 (if available)
TreeFam:
Gene Tree for LOC105374748 (if available)

No data available for Orthologs for LOC105374748 Gene

Paralogs for LOC105374748 Gene

No data available for Paralogs for LOC105374748 Gene

Variants for LOC105374748 Gene

Sequence variations from dbSNP and Humsavar for LOC105374748 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000156518 -- 43,022,323(+) G/A intron_variant
rs1000289700 -- 43,027,366(+) A/T genic_downstream_transcript_variant, intron_variant
rs1000396738 -- 43,033,632(+) T/C genic_downstream_transcript_variant, intron_variant
rs1000453657 -- 43,030,568(+) G/A genic_downstream_transcript_variant, intron_variant
rs1000510413 -- 43,022,050(+) A/G/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374748 Gene

Disorders for LOC105374748 Gene

No disorders were found for LOC105374748 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374748 Gene

Publications for LOC105374748 Gene

No publications were found for LOC105374748 Gene.

Products for LOC105374748 Gene

Sources for LOC105374748 Gene

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