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Aliases for LOC105374732 Gene

Subcategory (RNA class) for LOC105374732 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105374732 Gene

  • Uncharacterized LOC105374732 3
  • CTD-2263F21.1 3
  • AC010457.1 5

External Ids for LOC105374732 Gene

Previous GeneCards Identifiers for LOC105374732 Gene

  • GC05U902075

Summaries for LOC105374732 Gene

GeneCards Summary for LOC105374732 Gene

LOC105374732 (Uncharacterized LOC105374732) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374732 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374732 Gene

Genomics for LOC105374732 Gene

GeneHancer (GH) Regulatory Elements for LOC105374732 Gene

Promoters and enhancers for LOC105374732 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I038462 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +1.7 1657 8.3 ATF1 FOXA2 SIN3A FEZF1 BRCA1 ETS1 ATF7 FOS DEK RXRA LOC105374732 EGFLAM EGFLAM-AS1 ENSG00000248234 EGFLAM-AS2
GH05I038554 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.7 -88.1 -88083 3.2 CLOCK ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 ZNF213 ZNF263 SP3 LIFR LIFR-AS1 MIR3650 LOC105374732 EGFLAM-AS1 ENSG00000248234 EGFLAM-AS2 EGFLAM
GH05I038531 Enhancer 1.3 Ensembl ENCODE dbSUPER 11.1 -65.7 -65666 4.6 ELF3 FOXA2 ZNF133 ARID4B DMAP1 RARA ZNF335 SCRT2 SMARCC2 CREM LOC105374732 LIFR-AS1 LIFR
GH05I039013 Enhancer 1.1 Ensembl ENCODE 13 -546.9 -546891 3.4 HDAC1 YBX3 HDGF NFXL1 RAD21 YY1 ZNF280A POLR2B ARID2 ZNF366 LOC105374732 RICTOR OSMR AIG1P1 GC05M038934
GH05I038432 Enhancer 0.8 Ensembl ENCODE dbSUPER 10.7 +34.0 34049 3 JUN NR2F2 EGFLAM-AS2 EGFLAM LOC105374732 ENSG00000248234
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374732 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374732 Gene

Genomic Locations for LOC105374732 Gene
chr5:38,460,778-38,468,339
(GRCh38/hg38)
Size:
7,562 bases
Orientation:
Minus strand
chr5:38,461,029-38,468,441
(GRCh37/hg19)

Genomic View for LOC105374732 Gene

Genes around LOC105374732 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374732 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374732 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374732 Gene

Proteins for LOC105374732 Gene

Post-translational modifications for LOC105374732 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374732 Gene

Domains & Families for LOC105374732 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374732 Gene

Function for LOC105374732 Gene

Phenotypes From GWAS Catalog for LOC105374732 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374732 Gene

Localization for LOC105374732 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374732 Gene

Pathways & Interactions for LOC105374732 Gene

SuperPathways for LOC105374732 Gene

No Data Available

Interacting Proteins for LOC105374732 Gene

Gene Ontology (GO) - Biological Process for LOC105374732 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374732 Gene

Drugs & Compounds for LOC105374732 Gene

No Compound Related Data Available

Transcripts for LOC105374732 Gene

mRNA/cDNA for LOC105374732 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374732 Gene

No ASD Table

Relevant External Links for LOC105374732 Gene

GeneLoc Exon Structure for
LOC105374732

Expression for LOC105374732 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374732 Gene

Orthologs for LOC105374732 Gene

Evolution for LOC105374732 Gene

ENSEMBL:
Gene Tree for LOC105374732 (if available)
TreeFam:
Gene Tree for LOC105374732 (if available)

No data available for Orthologs for LOC105374732 Gene

Paralogs for LOC105374732 Gene

No data available for Paralogs for LOC105374732 Gene

Variants for LOC105374732 Gene

Sequence variations from dbSNP and Humsavar for LOC105374732 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000108875 -- 38,462,762(-) T/G non_coding_transcript_variant
rs1000683065 -- 38,463,669(-) G/A upstream_transcript_variant
rs1002271048 -- 38,463,582(-) A/C upstream_transcript_variant
rs1002575034 -- 38,464,774(-) A/G upstream_transcript_variant
rs1003049647 -- 38,459,885(-) C/A downstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374732 Gene

Disorders for LOC105374732 Gene

No disorders were found for LOC105374732 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374732 Gene

Publications for LOC105374732 Gene

No publications were found for LOC105374732 Gene.

Products for LOC105374732 Gene

Sources for LOC105374732 Gene

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