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Aliases for LOC105374721 Gene

Subcategory (RNA class) for LOC105374721 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374721 Gene

  • Uncharacterized LOC105374721 3

External Ids for LOC105374721 Gene

Previous GeneCards Identifiers for LOC105374721 Gene

  • GC05U902455

Summaries for LOC105374721 Gene

GeneCards Summary for LOC105374721 Gene

LOC105374721 (Uncharacterized LOC105374721) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374721 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374721 Gene

Genomics for LOC105374721 Gene

GeneHancer (GH) Regulatory Elements for LOC105374721 Gene

Promoters and enhancers for LOC105374721 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J034585 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 650.7 +1.3 1253 3.9 HDGF PKNOX1 CLOCK FOXA2 ARNT SIN3A POLR2B ZNF766 E2F8 FOS LOC105374721 BRIX1 RAI14 ENSG00000250234 TTC23L LOC643373
GH05J034582 Enhancer 0.9 FANTOM5 Ensembl dbSUPER 0.7 -3.0 -3001 0.4 OSR2 CTCF ZNF341 MZF1 ENSG00000250234 RAI14 LOC105374721 GC05P034404
GH05J034596 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +12.8 12832 3.5 PKNOX1 SIN3A FEZF1 ZNF2 KLF7 FOS SP3 RXRA JUNB TSHZ1 BRIX1 LOC643373 TTC23L LOC105374721 RAI14
GH05J034570 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -14.4 -14411 2.8 ZBTB6 JUN CEBPG BATF ZNF121 ZNF335 POLR2A NFATC1 EED CREM RAI14 ENSG00000250234 LOC105374721 GC05P034404
GH05J034583 Enhancer 0.7 FANTOM5 Ensembl dbSUPER 0.7 -2.2 -2193 0.8 ENSG00000250234 RAI14 TTC23L LOC105374721 GC05P034404
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374721 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374721 Gene

Genomic Locations for LOC105374721 Gene
chr5:34,585,802-34,590,317
(GRCh38/hg38)
Size:
4,516 bases
Orientation:
Plus strand

Genomic View for LOC105374721 Gene

Genes around LOC105374721 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374721 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374721 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374721 Gene

Proteins for LOC105374721 Gene

Post-translational modifications for LOC105374721 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374721 Gene

Domains & Families for LOC105374721 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374721 Gene

Function for LOC105374721 Gene

Phenotypes From GWAS Catalog for LOC105374721 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374721 Gene

Localization for LOC105374721 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374721 Gene

Pathways & Interactions for LOC105374721 Gene

SuperPathways for LOC105374721 Gene

No Data Available

Interacting Proteins for LOC105374721 Gene

Gene Ontology (GO) - Biological Process for LOC105374721 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374721 Gene

Drugs & Compounds for LOC105374721 Gene

No Compound Related Data Available

Transcripts for LOC105374721 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374721 Gene

No ASD Table

Relevant External Links for LOC105374721 Gene

GeneLoc Exon Structure for
LOC105374721

No data available for mRNA/cDNA for LOC105374721 Gene

Expression for LOC105374721 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374721 Gene

Orthologs for LOC105374721 Gene

No data available for Orthologs and Evolution for LOC105374721 Gene

Paralogs for LOC105374721 Gene

No data available for Paralogs for LOC105374721 Gene

Variants for LOC105374721 Gene

Sequence variations from dbSNP and Humsavar for LOC105374721 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000163990 -- 34,584,058(+) A/G upstream_transcript_variant
rs1000299487 -- 34,584,416(+) C/T upstream_transcript_variant
rs1000684701 -- 34,586,333(+) T/C intron_variant
rs1001418984 -- 34,588,570(+) T/C intron_variant
rs1001518117 -- 34,587,007(+) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374721 Gene

Disorders for LOC105374721 Gene

No disorders were found for LOC105374721 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374721 Gene

Publications for LOC105374721 Gene

No publications were found for LOC105374721 Gene.

Products for LOC105374721 Gene

Sources for LOC105374721 Gene

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