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Aliases for LOC105374711 Gene

Subcategory (RNA class) for LOC105374711 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374711 Gene

  • Uncharacterized LOC105374711 3

External Ids for LOC105374711 Gene

Previous GeneCards Identifiers for LOC105374711 Gene

  • GC05U902374

Summaries for LOC105374711 Gene

GeneCards Summary for LOC105374711 Gene

LOC105374711 (Uncharacterized LOC105374711) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374711 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374711 Gene

Genomics for LOC105374711 Gene

GeneHancer (GH) Regulatory Elements for LOC105374711 Gene

Promoters and enhancers for LOC105374711 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I032096 Enhancer 0.7 ENCODE dbSUPER 550.8 -0.5 -504 4.1 RFX1 POLR2A NFIB MAX NR2F2 LOC105374711 ENSG00000250764 MTMR12 PDZD2
GH05I032093 Enhancer 1 Ensembl ENCODE 0.8 +5.0 4974 0.5 HDGF RB1 ARNT BATF ZNF2 IRF4 ZSCAN9 RAD21 RFX5 ARID2 PDZD2 LOC105374711 MIR4279
GH05I032094 Enhancer 0.4 ENCODE 0.8 +3.3 3348 1.2 ZNF362 REST ENSG00000250764 PDZD2 RPL27P10 LOC105374711 MIR4279
GH05I032027 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +69.8 69758 3.1 SREBF2 SIN3A FEZF1 RAD21 RFX5 SMARCC2 RCOR1 FOS SMARCC1 USF2 PDZD2 SUB1 LOC105374711 MIR4279
GH05I032059 Enhancer 0.9 ENCODE dbSUPER 0.3 +38.5 38456 1.1 FOXA2 JUN BRCA1 RFX5 GTF3C2 SMC3 RCOR1 FOSL2 FOS CHD2 PDZD2 LOC105374711 MIR4279
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374711 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374711 Gene

Genomic Locations for LOC105374711 Gene
chr5:32,097,671-32,098,396
(GRCh38/hg38)
Size:
726 bases
Orientation:
Minus strand

Genomic View for LOC105374711 Gene

Genes around LOC105374711 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374711 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374711 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374711 Gene

Proteins for LOC105374711 Gene

Post-translational modifications for LOC105374711 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374711 Gene

Domains & Families for LOC105374711 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374711 Gene

Function for LOC105374711 Gene

Phenotypes From GWAS Catalog for LOC105374711 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374711 Gene

Localization for LOC105374711 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374711 Gene

Pathways & Interactions for LOC105374711 Gene

SuperPathways for LOC105374711 Gene

No Data Available

Interacting Proteins for LOC105374711 Gene

Gene Ontology (GO) - Biological Process for LOC105374711 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374711 Gene

Drugs & Compounds for LOC105374711 Gene

No Compound Related Data Available

Transcripts for LOC105374711 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374711 Gene

No ASD Table

Relevant External Links for LOC105374711 Gene

GeneLoc Exon Structure for
LOC105374711

No data available for mRNA/cDNA for LOC105374711 Gene

Expression for LOC105374711 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374711 Gene

Orthologs for LOC105374711 Gene

No data available for Orthologs and Evolution for LOC105374711 Gene

Paralogs for LOC105374711 Gene

No data available for Paralogs for LOC105374711 Gene

Variants for LOC105374711 Gene

Sequence variations from dbSNP and Humsavar for LOC105374711 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs879255433 uncertain-significance, not specified 32,098,373(-) G/A non_coding_transcript_variant
rs1000021624 -- 32,100,037(-) T/C upstream_transcript_variant
rs1003030444 -- 32,098,275(-) C/A intron_variant
rs1003521054 -- 32,099,179(-) C/G upstream_transcript_variant
rs1003906990 -- 32,099,904(-) G/A/C upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374711 Gene

Disorders for LOC105374711 Gene

No disorders were found for LOC105374711 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374711 Gene

Publications for LOC105374711 Gene

No publications were found for LOC105374711 Gene.

Products for LOC105374711 Gene

Sources for LOC105374711 Gene

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