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Aliases for LOC105374703 Gene

Subcategory (RNA class) for LOC105374703 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374703 Gene

  • Uncharacterized LOC105374703 3
  • AC108082.1 5

External Ids for LOC105374703 Gene

Previous GeneCards Identifiers for LOC105374703 Gene

  • GC05U902310

Summaries for LOC105374703 Gene

GeneCards Summary for LOC105374703 Gene

LOC105374703 (Uncharacterized LOC105374703) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374703 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374703 Gene

Genomics for LOC105374703 Gene

GeneHancer (GH) Regulatory Elements for LOC105374703 Gene

Promoters and enhancers for LOC105374703 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J029795 Enhancer 0.6 ENCODE 650.7 +1.7 1688 0.2 ZNF639 MAFG EP300 ZNF592 ZNF316 IKZF1 NFE2 MAFK EMSY NFE2L2 LOC105374703 GC05P029795 PGBD3P2
GH05J029796 Enhancer 1 FANTOM5 ENCODE 0.7 +2.5 2539 0.7 ARNT CHAMP1 TCF12 GATA2 CREM NCOA1 MBD2 ATF4 NFIC SMARCA4 GC05P029795 LOC105374703 LOC100421071
GH05J029780 Enhancer 0.8 ENCODE 0.4 -13.1 -13052 0.2 ELF3 FOXA2 ZNF48 ZSCAN9 RARA ZNF614 CREM ZBTB25 REST PPARG GC05P029779 LOC105374703
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374703 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374703 Gene

Genomic Locations for LOC105374703 Gene
chr5:29,793,721-29,814,358
(GRCh38/hg38)
Size:
20,638 bases
Orientation:
Plus strand
chr5:29,796,045-29,796,375
(GRCh37/hg19)
Size:
331 bases
Orientation:
Plus strand

Genomic View for LOC105374703 Gene

Genes around LOC105374703 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374703 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374703 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374703 Gene

Proteins for LOC105374703 Gene

Post-translational modifications for LOC105374703 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374703 Gene

Domains & Families for LOC105374703 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374703 Gene

Function for LOC105374703 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374703 Gene

Localization for LOC105374703 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374703 Gene

Pathways & Interactions for LOC105374703 Gene

SuperPathways for LOC105374703 Gene

No Data Available

Interacting Proteins for LOC105374703 Gene

Gene Ontology (GO) - Biological Process for LOC105374703 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374703 Gene

Drugs & Compounds for LOC105374703 Gene

No Compound Related Data Available

Transcripts for LOC105374703 Gene

mRNA/cDNA for LOC105374703 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374703 Gene

No ASD Table

Relevant External Links for LOC105374703 Gene

GeneLoc Exon Structure for
LOC105374703

Expression for LOC105374703 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374703 Gene

Orthologs for LOC105374703 Gene

Evolution for LOC105374703 Gene

ENSEMBL:
Gene Tree for LOC105374703 (if available)
TreeFam:
Gene Tree for LOC105374703 (if available)

No data available for Orthologs for LOC105374703 Gene

Paralogs for LOC105374703 Gene

No data available for Paralogs for LOC105374703 Gene

Variants for LOC105374703 Gene

Sequence variations from dbSNP and Humsavar for LOC105374703 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000112228 -- 29,797,322(+) AGAAGAA/AGAA genic_upstream_transcript_variant, intron_variant
rs1000162084 -- 29,794,086(+) G/A genic_upstream_transcript_variant, intron_variant
rs1000202719 -- 29,812,456(+) T/A intron_variant
rs1000441372 -- 29,797,149(+) A/G genic_upstream_transcript_variant, intron_variant
rs1000453048 -- 29,800,170(+) T/C genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374703 Gene

Disorders for LOC105374703 Gene

No disorders were found for LOC105374703 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374703 Gene

Publications for LOC105374703 Gene

No publications were found for LOC105374703 Gene.

Products for LOC105374703 Gene

Sources for LOC105374703 Gene

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