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Aliases for LOC105374690 Gene

Subcategory (RNA class) for LOC105374690 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374690 Gene

  • Uncharacterized LOC105374690 3

External Ids for LOC105374690 Gene

Previous GeneCards Identifiers for LOC105374690 Gene

  • GC02U903088

Summaries for LOC105374690 Gene

GeneCards Summary for LOC105374690 Gene

LOC105374690 (Uncharacterized LOC105374690) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374690 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374690 Gene

Genomics for LOC105374690 Gene

GeneHancer (GH) Regulatory Elements for LOC105374690 Gene

Promoters and enhancers for LOC105374690 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J055947 Enhancer 0.6 ENCODE 0.7 +2.1 2107 0.1 OSR2 GATA3 PRDM6 BCL6B CEBPB EP300 WT1 ZKSCAN1 EFEMP1 MIR217 MIR216A GC02M055952 RN7SKP208 LOC105374690
GH02J055957 Enhancer 0.9 Ensembl ENCODE 0.4 +12.9 12860 1.4 PKNOX1 MXI1 JUN MAX SIN3A RAD21 RFX5 CTBP1 GATA3 SCRT2 EFEMP1 MIR217 MIR216A ENSG00000240401 ENSG00000272180 LOC105374690 GC02P055982
GH02J055961 Enhancer 0.6 ENCODE 0.4 +15.7 15657 0.2 CTCF ZNF654 TRIM22 REST ZNF2 RAD21 RFX5 ATF3 SMC3 MIR216A MIR217 ENSG00000272180 LOC105374690 GC02P055982
GH02J055991 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.2 +47.0 47020 2.5 JUN MAX BRCA1 RFX5 POLR2A RCOR1 FOSL2 FOS CHD2 TCF7L2 EFEMP1 MIR216A GC02P056001 ENSG00000272180 LOC105374690 MIR217HG
GH02J055965 Enhancer 0.7 Ensembl ENCODE 0.3 +20.4 20427 1.8 IKZF1 JUN MNT NR2F2 MIR216A EFEMP1 ENSG00000240401 ENSG00000272180 GC02P055982 LOC105374690 MIR217HG
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374690 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374690 Gene

Genomic Locations for LOC105374690 Gene
chr2:55,945,824-56,177,552
(GRCh38/hg38)
Size:
231,729 bases
Orientation:
Plus strand

Genomic View for LOC105374690 Gene

Genes around LOC105374690 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374690 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374690 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374690 Gene

Proteins for LOC105374690 Gene

Post-translational modifications for LOC105374690 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374690 Gene

Domains & Families for LOC105374690 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374690 Gene

Function for LOC105374690 Gene

Phenotypes From GWAS Catalog for LOC105374690 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374690 Gene

Localization for LOC105374690 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374690 Gene

Pathways & Interactions for LOC105374690 Gene

SuperPathways for LOC105374690 Gene

No Data Available

Interacting Proteins for LOC105374690 Gene

Gene Ontology (GO) - Biological Process for LOC105374690 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374690 Gene

Drugs & Compounds for LOC105374690 Gene

No Compound Related Data Available

Transcripts for LOC105374690 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374690 Gene

No ASD Table

Relevant External Links for LOC105374690 Gene

GeneLoc Exon Structure for
LOC105374690

No data available for mRNA/cDNA for LOC105374690 Gene

Expression for LOC105374690 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374690 Gene

Orthologs for LOC105374690 Gene

No data available for Orthologs and Evolution for LOC105374690 Gene

Paralogs for LOC105374690 Gene

No data available for Paralogs for LOC105374690 Gene

Variants for LOC105374690 Gene

Sequence variations from dbSNP and Humsavar for LOC105374690 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000001151 -- 56,002,678(+) C/G intron_variant
rs1000017486 -- 56,025,779(+) A/T intron_variant
rs1000043202 -- 56,098,779(+) G/A intron_variant
rs1000064895 -- 55,977,196(+) T/C intron_variant
rs1000070806 -- 55,944,231(+) A/G upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374690 Gene

Disorders for LOC105374690 Gene

Additional Disease Information for LOC105374690

No disorders were found for LOC105374690 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105374690 Gene

Publications for LOC105374690 Gene

No publications were found for LOC105374690 Gene.

Products for LOC105374690 Gene

Sources for LOC105374690 Gene

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