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Aliases for LOC105374685 Gene

Subcategory (RNA class) for LOC105374685 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105374685 Gene

  • Uncharacterized LOC105374685 3
  • AC091946.1 5

External Ids for LOC105374685 Gene

Previous GeneCards Identifiers for LOC105374685 Gene

  • GC05U902474
  • GC05P021617
  • GC05P021618
  • GC05P021632
  • GC05P021646
  • GC05P021660

Summaries for LOC105374685 Gene

GeneCards Summary for LOC105374685 Gene

LOC105374685 (Uncharacterized LOC105374685) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374685 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374685 Gene

Genomics for LOC105374685 Gene

GeneHancer (GH) Regulatory Elements for LOC105374685 Gene

Promoters and enhancers for LOC105374685 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I021613 Enhancer 0.4 ENCODE 550.8 -1.9 -1894 2.2 MAX POU5F1 LOC105374685 GUSBP1 PIR32648
GH05I021615 Enhancer 0.2 ENCODE 550.8 -0.7 -700 0.2 LOC105374685 PIR32648
GH05I021774 Enhancer 0.6 ENCODE 9.3 +158.6 158647 1.5 JUN EP300 JUND POLR2A FOS FOSL2 RCOR1 TCF7L2 LOC105374685 LOC105374683
GH05I021679 Enhancer 0.7 ENCODE 6 +64.2 64166 1.5 JUN MAX USF2 CEBPB EP300 RAD21 RFX5 HIC1 JUND STAT3 LOC105374685 LOC105374683
GH05I021808 Enhancer 0.6 ENCODE 4.1 +191.9 191890 0.1 SMARCE1 STAT1 RFX1 DPF2 FOXA1 GATA3 CTBP1 FOS LOC105374685 LOC105374683
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374685 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374685 Gene

Genomic Locations for LOC105374685 Gene
chr5:21,616,247-21,779,522
(GRCh38/hg38)
Size:
163,276 bases
Orientation:
Plus strand
chr5:21,616,371-21,779,631
(GRCh37/hg19)

Genomic View for LOC105374685 Gene

Genes around LOC105374685 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374685 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374685 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374685 Gene

Proteins for LOC105374685 Gene

Post-translational modifications for LOC105374685 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374685 Gene

Domains & Families for LOC105374685 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374685 Gene

Function for LOC105374685 Gene

Phenotypes From GWAS Catalog for LOC105374685 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374685 Gene

Localization for LOC105374685 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374685 Gene

Pathways & Interactions for LOC105374685 Gene

SuperPathways for LOC105374685 Gene

No Data Available

Interacting Proteins for LOC105374685 Gene

Gene Ontology (GO) - Biological Process for LOC105374685 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374685 Gene

Drugs & Compounds for LOC105374685 Gene

No Compound Related Data Available

Transcripts for LOC105374685 Gene

mRNA/cDNA for LOC105374685 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374685 Gene

No ASD Table

Relevant External Links for LOC105374685 Gene

GeneLoc Exon Structure for
LOC105374685

Expression for LOC105374685 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374685 Gene

Orthologs for LOC105374685 Gene

Evolution for LOC105374685 Gene

ENSEMBL:
Gene Tree for LOC105374685 (if available)
TreeFam:
Gene Tree for LOC105374685 (if available)

No data available for Orthologs for LOC105374685 Gene

Paralogs for LOC105374685 Gene

No data available for Paralogs for LOC105374685 Gene

Variants for LOC105374685 Gene

Sequence variations from dbSNP and Humsavar for LOC105374685 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000016551 -- 21,673,481(+) A/G intron_variant
rs1000084754 -- 21,674,843(+) G/A intron_variant
rs1000094015 -- 21,632,573(+) T/C intron_variant
rs1000140754 -- 21,630,302(+) A/C intron_variant
rs1000147100 -- 21,661,881(+) A/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374685 Gene

Disorders for LOC105374685 Gene

No disorders were found for LOC105374685 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374685 Gene

Publications for LOC105374685 Gene

No publications were found for LOC105374685 Gene.

Products for LOC105374685 Gene

Sources for LOC105374685 Gene

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