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Aliases for LOC105374667 Gene

Subcategory (RNA class) for LOC105374667 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374667 Gene

  • Uncharacterized LOC105374667 3
  • AC104781.1 5

External Ids for LOC105374667 Gene

Previous GeneCards Identifiers for LOC105374667 Gene

  • GC02U903943

Summaries for LOC105374667 Gene

GeneCards Summary for LOC105374667 Gene

LOC105374667 (Uncharacterized LOC105374667) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374667 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374667 Gene

Genomics for LOC105374667 Gene

GeneHancer (GH) Regulatory Elements for LOC105374667 Gene

Promoters and enhancers for LOC105374667 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J054750 Enhancer 0.3 FANTOM5 650.7 +0.0 14 0.1 YY1 LOC105374667 TSPYL6 EML6 C2orf73 GC02M054734
GH02J054767 Enhancer 0.8 Ensembl ENCODE 21.8 -17.4 -17412 1.6 JUN ZSCAN4 JUNB ATF4 PRDM6 JUND ZNF366 ZBTB12 PRDM1 LOC105374667 EML6 RTN4 SPTBN1 PSME4 GC02P054774
GH02J054496 Enhancer 1.2 Ensembl ENCODE dbSUPER 10 +251.3 251304 4.5 ARID4B DMAP1 RAD21 SLC30A9 ZNF121 TCF12 CEBPB CEBPA HNF4A MGA EML6 SPTBN1 C2orf73 ACYP2 RNU7-81P LOC105374667 PRORSD1P GC02M054483 GC02P054516
GH02J054081 Enhancer 1.1 ENCODE dbSUPER 9.6 +668.6 668619 1.4 PKNOX1 ATF1 IRF4 TCF12 GATA2 FOS ATF7 RUNX3 NCOA1 JUNB PIR44044 ENSG00000272156 ENSG00000241114 ACYP2 HMGB1P31 RNU7-172P LOC105374667
GH02J054873 Enhancer 1 ENCODE dbSUPER 9.9 -122.8 -122778 0.4 ELF3 FOXA2 ARID4B RAD21 ETS1 ZNF614 SMARCC2 THAP11 MIXL1 ELF1 EML6 RTN4 RNU7-81P LOC105374667 GC02M054852 GC02P054889
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374667 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374667 Gene

Genomic Locations for LOC105374667 Gene
chr2:54,747,103-54,750,515
(GRCh38/hg38)
Size:
3,413 bases
Orientation:
Minus strand
chr2:54,974,240-54,975,541
(GRCh37/hg19)
Size:
1,302 bases
Orientation:
Minus strand

Genomic View for LOC105374667 Gene

Genes around LOC105374667 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374667 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374667 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374667 Gene

Proteins for LOC105374667 Gene

Post-translational modifications for LOC105374667 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374667 Gene

Domains & Families for LOC105374667 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374667 Gene

Function for LOC105374667 Gene

Phenotypes From GWAS Catalog for LOC105374667 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374667 Gene

Localization for LOC105374667 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374667 Gene

Pathways & Interactions for LOC105374667 Gene

SuperPathways for LOC105374667 Gene

No Data Available

Interacting Proteins for LOC105374667 Gene

Gene Ontology (GO) - Biological Process for LOC105374667 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374667 Gene

Drugs & Compounds for LOC105374667 Gene

No Compound Related Data Available

Transcripts for LOC105374667 Gene

mRNA/cDNA for LOC105374667 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374667 Gene

No ASD Table

Relevant External Links for LOC105374667 Gene

GeneLoc Exon Structure for
LOC105374667

Expression for LOC105374667 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374667 Gene

Orthologs for LOC105374667 Gene

Evolution for LOC105374667 Gene

ENSEMBL:
Gene Tree for LOC105374667 (if available)
TreeFam:
Gene Tree for LOC105374667 (if available)

No data available for Orthologs for LOC105374667 Gene

Paralogs for LOC105374667 Gene

No data available for Paralogs for LOC105374667 Gene

Variants for LOC105374667 Gene

Sequence variations from dbSNP and Humsavar for LOC105374667 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000218153 -- 54,749,286(-) A/T intron_variant
rs1000616064 -- 54,750,687(-) C/A non_coding_transcript_variant
rs1000751767 -- 54,750,932(-) T/A upstream_transcript_variant
rs1001335770 -- 54,745,929(-) C/T non_coding_transcript_variant
rs1001421850 -- 54,748,407(-) C/A non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374667 Gene

Disorders for LOC105374667 Gene

No disorders were found for LOC105374667 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374667 Gene

Publications for LOC105374667 Gene

No publications were found for LOC105374667 Gene.

Products for LOC105374667 Gene

Sources for LOC105374667 Gene

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