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Aliases for LOC105374662 Gene

Subcategory (RNA class) for LOC105374662 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374662 Gene

  • Uncharacterized LOC105374662 3

External Ids for LOC105374662 Gene

Previous GeneCards Identifiers for LOC105374662 Gene

  • GC02U903297

Summaries for LOC105374662 Gene

GeneCards Summary for LOC105374662 Gene

LOC105374662 (Uncharacterized LOC105374662) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374662 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374662 Gene

Genomics for LOC105374662 Gene

GeneHancer (GH) Regulatory Elements for LOC105374662 Gene

Promoters and enhancers for LOC105374662 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I055045 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.3 -30.8 -30790 8.2 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 ZNF263 SP3 RTN4 RPS27A PRORSD1P RNU6-433P ENSG00000272156 CLHC1 EML6 GC02P055039 LOC105374662
GH02I055083 Enhancer 0.5 dbSUPER 0.8 +3.6 3631 1.3 ELK4 FOXA2 ETV4 CEBPA CEBPB CEBPG FOXA1 RTN4 CLHC1 PRORSD1P GC02P055086 LOC105374662
GH02I055053 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -26.0 -25955 1.3 ZNF639 NR2F1 JUNB DPF2 BATF HDAC8 ZNF644 ATF2 IRF4 IRF9 RTN4 GC02P055039 LOC105374662
GH02I055038 Enhancer 0.9 ENCODE dbSUPER 0.3 -41.6 -41570 0.1 BACH1 EBF1 CEBPG NCOA2 CHAMP1 ZNF316 ZNF143 NFE2 TRIM24 MAFK GC02P055039 RTN4 LOC105374662
GH02I055055 Enhancer 0.9 dbSUPER 0.3 -24.0 -23982 0.9 HDGF ATF1 PKNOX1 ARNT TCF12 ATF7 CAVIN1 REST ZNF592 MEF2D RTN4 GC02P055039 LOC105374662
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374662 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374662 Gene

Genomic Locations for LOC105374662 Gene
chr2:55,080,230-55,086,883
(GRCh38/hg38)
Size:
6,654 bases
Orientation:
Plus strand

Genomic View for LOC105374662 Gene

Genes around LOC105374662 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374662 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374662 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374662 Gene

Proteins for LOC105374662 Gene

Post-translational modifications for LOC105374662 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374662 Gene

Domains & Families for LOC105374662 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374662 Gene

Function for LOC105374662 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374662 Gene

Localization for LOC105374662 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374662 Gene

Pathways & Interactions for LOC105374662 Gene

SuperPathways for LOC105374662 Gene

No Data Available

Interacting Proteins for LOC105374662 Gene

Gene Ontology (GO) - Biological Process for LOC105374662 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374662 Gene

Drugs & Compounds for LOC105374662 Gene

No Compound Related Data Available

Transcripts for LOC105374662 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374662 Gene

No ASD Table

Relevant External Links for LOC105374662 Gene

GeneLoc Exon Structure for
LOC105374662

No data available for mRNA/cDNA for LOC105374662 Gene

Expression for LOC105374662 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374662 Gene

Orthologs for LOC105374662 Gene

No data available for Orthologs and Evolution for LOC105374662 Gene

Paralogs for LOC105374662 Gene

No data available for Paralogs for LOC105374662 Gene

Variants for LOC105374662 Gene

Sequence variations from dbSNP and Humsavar for LOC105374662 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000052566 -- 55,081,909(+) C/T intron_variant
rs1000123172 -- 55,079,500(+) G/A upstream_transcript_variant
rs1000505811 -- 55,081,708(+) T/A/C intron_variant
rs1000827258 -- 55,086,415(+) C/T intron_variant
rs1000937058 -- 55,086,330(+) A/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374662 Gene

Disorders for LOC105374662 Gene

No disorders were found for LOC105374662 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374662 Gene

Publications for LOC105374662 Gene

No publications were found for LOC105374662 Gene.

Products for LOC105374662 Gene

Sources for LOC105374662 Gene

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