Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105374661 Gene

Subcategory (RNA class) for LOC105374661 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374661 Gene

  • Uncharacterized LOC105374661 3

External Ids for LOC105374661 Gene

Previous GeneCards Identifiers for LOC105374661 Gene

  • GC05U902338

Summaries for LOC105374661 Gene

GeneCards Summary for LOC105374661 Gene

LOC105374661 (Uncharacterized LOC105374661) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374661 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374661 Gene

Genomics for LOC105374661 Gene

GeneHancer (GH) Regulatory Elements for LOC105374661 Gene

Promoters and enhancers for LOC105374661 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I014900 Enhancer 1 Ensembl ENCODE 0.4 +18.0 17954 1.9 HDAC1 FOXA2 RFX5 TCF12 SMARCC2 RCOR1 FOS ZNF214 DEK EGR2 LOC105374661 SEPHS2P1
GH05I014925 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.3 +42.7 42678 1.6 FOXA2 MAX EBF1 BATF ZFHX2 POLR2A EGR1 NFATC1 FOS ETV6 ANKH SEPHS2P1 LOC105374661
GH05I014893 Enhancer 0.6 ENCODE 0.4 +11.5 11459 3.8 CTCF HLF ATF2 POLR2A ZNF692 GLIS1 SCRT2 BCL6B CREB1 FOS LOC105374661 SEPHS2P1
GH05I014914 Enhancer 0.8 ENCODE 0.3 +31.8 31817 1.3 FOXA2 RARA FOS CREM THAP11 SP5 CEBPB NFIL3 RCOR2 CEBPA LOC105374661 SEPHS2P1
GH05I014959 Enhancer 0.8 ENCODE 0.2 +76.1 76105 0.2 ESRRA MXI1 JUN MAX SIN3A RARA ZKSCAN1 E2F1 CTBP1 GATA3 SEPHS2P1 LOC105374661
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374661 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374661 Gene

Genomic Locations for LOC105374661 Gene
chr5:14,883,562-14,892,660
(GRCh38/hg38)
Size:
9,099 bases
Orientation:
Plus strand

Genomic View for LOC105374661 Gene

Genes around LOC105374661 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374661 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374661 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374661 Gene

Proteins for LOC105374661 Gene

Post-translational modifications for LOC105374661 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374661 Gene

Domains & Families for LOC105374661 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374661 Gene

Function for LOC105374661 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374661 Gene

Localization for LOC105374661 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374661 Gene

Pathways & Interactions for LOC105374661 Gene

SuperPathways for LOC105374661 Gene

No Data Available

Interacting Proteins for LOC105374661 Gene

Gene Ontology (GO) - Biological Process for LOC105374661 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374661 Gene

Drugs & Compounds for LOC105374661 Gene

No Compound Related Data Available

Transcripts for LOC105374661 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374661 Gene

No ASD Table

Relevant External Links for LOC105374661 Gene

GeneLoc Exon Structure for
LOC105374661

No data available for mRNA/cDNA for LOC105374661 Gene

Expression for LOC105374661 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374661 Gene

Orthologs for LOC105374661 Gene

No data available for Orthologs and Evolution for LOC105374661 Gene

Paralogs for LOC105374661 Gene

No data available for Paralogs for LOC105374661 Gene

Variants for LOC105374661 Gene

Sequence variations from dbSNP and Humsavar for LOC105374661 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000234204 -- 14,887,188(+) C/T upstream_transcript_variant
rs1000264247 -- 14,893,016(+) T/G downstream_transcript_variant
rs1000415966 -- 14,887,439(+) T/G upstream_transcript_variant
rs1000733119 -- 14,888,516(+) /A upstream_transcript_variant
rs1000808593 -- 14,887,220(+) G/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374661 Gene

Disorders for LOC105374661 Gene

No disorders were found for LOC105374661 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374661 Gene

Publications for LOC105374661 Gene

No publications were found for LOC105374661 Gene.

Products for LOC105374661 Gene

Sources for LOC105374661 Gene

Content
Loading form....