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Aliases for LOC105374651 Gene

Subcategory (RNA class) for LOC105374651 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374651 Gene

  • Uncharacterized LOC105374651 3

External Ids for LOC105374651 Gene

Previous GeneCards Identifiers for LOC105374651 Gene

  • GC05U902311

Summaries for LOC105374651 Gene

GeneCards Summary for LOC105374651 Gene

LOC105374651 (Uncharacterized LOC105374651) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374651 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374651 Gene

Genomics for LOC105374651 Gene

GeneHancer (GH) Regulatory Elements for LOC105374651 Gene

Promoters and enhancers for LOC105374651 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I010313 Enhancer 0.6 dbSUPER 550.8 -0.9 -873 3.3 ZSCAN5A PKNOX1 NFYC CC2D1A SP1 SLC30A9 GABPB1 ZNF512 ZBTB33 LOC105374651 MARCH6 ROPN1L ROPN1L-AS1 GC05M010284 CMBL
GH05I010304 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 0.4 -7.9 -7900 6.6 HDGF PKNOX1 SMAD1 FOXA2 ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B CMBL MARCH6 ROPN1L ROPN1L-AS1 FAM173B CCT5 ENSG00000271980 LOC105374651 GC05M010284
GH05I010317 Enhancer 1.2 ENCODE dbSUPER 0.8 +2.5 2545 2.3 PKNOX1 ATF1 ARNT TCF12 ZNF766 CBX5 GATA2 E2F8 ARID2 FOS GC05M010284 MARCH6 LOC105374651 PIR33262
GH05I010311 Enhancer 0.9 ENCODE dbSUPER 0.8 -4.3 -4348 0.1 HDAC1 PKNOX1 ZSCAN4 ZBTB40 CHAMP1 CC2D1A CTBP1 TRIM24 PRDM10 SMARCE1 MARCH6 ROPN1L ROPN1L-AS1 CMBL LOC105374651 GC05M010284
GH05I010329 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +14.6 14590 2.7 ELF3 FOXA2 ARID4B DMAP1 ZSCAN9 RAD21 RARA YY1 RCOR1 THAP11 PIR33262 MARCH6 CMBL ROPN1L ROPN1L-AS1 GC05P010338 LOC105374651
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374651 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374651 Gene

Genomic Locations for LOC105374651 Gene
chr5:10,316,100-10,332,129
(GRCh38/hg38)
Size:
16,030 bases
Orientation:
Plus strand

Genomic View for LOC105374651 Gene

Genes around LOC105374651 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374651 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374651 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374651 Gene

Proteins for LOC105374651 Gene

Post-translational modifications for LOC105374651 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374651 Gene

Domains & Families for LOC105374651 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374651 Gene

Function for LOC105374651 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374651 Gene

Localization for LOC105374651 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374651 Gene

Pathways & Interactions for LOC105374651 Gene

SuperPathways for LOC105374651 Gene

No Data Available

Interacting Proteins for LOC105374651 Gene

Gene Ontology (GO) - Biological Process for LOC105374651 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374651 Gene

Drugs & Compounds for LOC105374651 Gene

No Compound Related Data Available

Transcripts for LOC105374651 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374651 Gene

No ASD Table

Relevant External Links for LOC105374651 Gene

GeneLoc Exon Structure for
LOC105374651

No data available for mRNA/cDNA for LOC105374651 Gene

Expression for LOC105374651 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374651 Gene

Orthologs for LOC105374651 Gene

No data available for Orthologs and Evolution for LOC105374651 Gene

Paralogs for LOC105374651 Gene

No data available for Paralogs for LOC105374651 Gene

Variants for LOC105374651 Gene

Sequence variations from dbSNP and Humsavar for LOC105374651 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000437309 -- 10,327,595(+) G/A intron_variant
rs1000477462 -- 10,315,367(+) G/T upstream_transcript_variant
rs1000598884 -- 10,321,144(+) T/G genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000933847 -- 10,319,737(+) CC/C genic_upstream_transcript_variant, intron_variant
rs1001281126 -- 10,320,002(+) A/C genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374651 Gene

Disorders for LOC105374651 Gene

No disorders were found for LOC105374651 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374651 Gene

Publications for LOC105374651 Gene

No publications were found for LOC105374651 Gene.

Products for LOC105374651 Gene

Sources for LOC105374651 Gene

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