Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105374645 Gene

Subcategory (RNA class) for LOC105374645 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374645 Gene

  • Uncharacterized LOC105374645 3
  • CTD-2296D1.3 3
  • CTD-2296D1.4 3

External Ids for LOC105374645 Gene

Previous GeneCards Identifiers for LOC105374645 Gene

  • GC05U902543

Summaries for LOC105374645 Gene

GeneCards Summary for LOC105374645 Gene

LOC105374645 (Uncharacterized LOC105374645) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374645 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374645 Gene

Genomics for LOC105374645 Gene

GeneHancer (GH) Regulatory Elements for LOC105374645 Gene

Promoters and enhancers for LOC105374645 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I007393 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 -22.6 -22570 3.5 CTCF MAZ SP3 ZNF362 BACH1 SIN3A ZNF398 REST ZNF335 ZFHX2 ADCY2 C5orf49 LOC105374645
GH05I007391 Enhancer 0.8 ENCODE dbSUPER 0.4 -19.1 -19093 1.9 CTCF FOXA2 SIN3A ELF1 RAD21 GABPA SMC3 ZNF143 CUX1 ENSG00000247732 ADCY2 LOC105374645 LINC02142
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374645 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374645 Gene

Genomic Locations for LOC105374645 Gene
chr5:7,362,936-7,373,142
(GRCh38/hg38)
Size:
10,207 bases
Orientation:
Minus strand

Genomic View for LOC105374645 Gene

Genes around LOC105374645 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374645 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374645 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374645 Gene

Proteins for LOC105374645 Gene

Post-translational modifications for LOC105374645 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374645 Gene

Domains & Families for LOC105374645 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374645 Gene

Function for LOC105374645 Gene

Phenotypes From GWAS Catalog for LOC105374645 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374645 Gene

Localization for LOC105374645 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374645 Gene

Pathways & Interactions for LOC105374645 Gene

SuperPathways for LOC105374645 Gene

No Data Available

Interacting Proteins for LOC105374645 Gene

Gene Ontology (GO) - Biological Process for LOC105374645 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374645 Gene

Drugs & Compounds for LOC105374645 Gene

No Compound Related Data Available

Transcripts for LOC105374645 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374645 Gene

No ASD Table

Relevant External Links for LOC105374645 Gene

GeneLoc Exon Structure for
LOC105374645

No data available for mRNA/cDNA for LOC105374645 Gene

Expression for LOC105374645 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374645 Gene

Orthologs for LOC105374645 Gene

No data available for Orthologs and Evolution for LOC105374645 Gene

Paralogs for LOC105374645 Gene

No data available for Paralogs for LOC105374645 Gene

Variants for LOC105374645 Gene

Sequence variations from dbSNP and Humsavar for LOC105374645 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000060683 -- 7,372,820(-) A/C genic_upstream_transcript_variant, intron_variant
rs1000078203 -- 7,363,740(-) G/A intron_variant
rs1000127844 -- 7,366,604(-) G/A intron_variant
rs1000244401 -- 7,366,308(-) C/T intron_variant
rs1000272777 -- 7,370,114(-) A/C genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374645 Gene

Disorders for LOC105374645 Gene

No disorders were found for LOC105374645 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374645 Gene

Publications for LOC105374645 Gene

No publications were found for LOC105374645 Gene.

Products for LOC105374645 Gene

Sources for LOC105374645 Gene

Content
Loading form....