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Aliases for LOC105374643 Gene

Subcategory (RNA class) for LOC105374643 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374643 Gene

  • Uncharacterized LOC105374643 3

External Ids for LOC105374643 Gene

Previous GeneCards Identifiers for LOC105374643 Gene

  • GC05U902045

Summaries for LOC105374643 Gene

GeneCards Summary for LOC105374643 Gene

LOC105374643 (Uncharacterized LOC105374643) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374643 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374643 Gene

Genomics for LOC105374643 Gene

GeneHancer (GH) Regulatory Elements for LOC105374643 Gene

Promoters and enhancers for LOC105374643 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I007262 Enhancer 0.7 Ensembl ENCODE 0.4 -9.7 -9668 1.8 MEIS2 PKNOX1 CEBPB CEBPG ZNF507 LOC105374643 ENSG00000237611
GH05I007260 Enhancer 0.6 ENCODE 0.4 -11.6 -11577 1 CTCF ZNF654 MAX BACH1 REST RAD21 SP1 ARID2 ZNF143 CTBP2 ENSG00000247732 ADCY2 LOC105374643 ENSG00000237611
GH05I007250 Enhancer 0.6 FANTOM5 Ensembl 0.3 -21.7 -21708 1 POLR2A GABPA ADCY2 LOC442132 ENSG00000237611 LOC105374643
GH05I007269 Enhancer 0.2 ENCODE 0.8 -3.1 -3062 0.9 ENSG00000249865 LINC02142 C5orf49 MTRR ENSG00000247732 LOC105374643 ENSG00000237611
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374643 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374643 Gene

Genomic Locations for LOC105374643 Gene
chr5:7,272,809-7,277,788
(GRCh38/hg38)
Size:
4,980 bases
Orientation:
Plus strand

Genomic View for LOC105374643 Gene

Genes around LOC105374643 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374643 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374643 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374643 Gene

Proteins for LOC105374643 Gene

Post-translational modifications for LOC105374643 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374643 Gene

Domains & Families for LOC105374643 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374643 Gene

Function for LOC105374643 Gene

Phenotypes From GWAS Catalog for LOC105374643 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374643 Gene

Localization for LOC105374643 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374643 Gene

Pathways & Interactions for LOC105374643 Gene

SuperPathways for LOC105374643 Gene

No Data Available

Interacting Proteins for LOC105374643 Gene

Gene Ontology (GO) - Biological Process for LOC105374643 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374643 Gene

Drugs & Compounds for LOC105374643 Gene

No Compound Related Data Available

Transcripts for LOC105374643 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374643 Gene

No ASD Table

Relevant External Links for LOC105374643 Gene

GeneLoc Exon Structure for
LOC105374643

No data available for mRNA/cDNA for LOC105374643 Gene

Expression for LOC105374643 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374643 Gene

Orthologs for LOC105374643 Gene

No data available for Orthologs and Evolution for LOC105374643 Gene

Paralogs for LOC105374643 Gene

No data available for Paralogs for LOC105374643 Gene

Variants for LOC105374643 Gene

Sequence variations from dbSNP and Humsavar for LOC105374643 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000794623 -- 7,272,524(+) A/G upstream_transcript_variant
rs1001014081 -- 7,273,334(+) T/G intron_variant
rs1001444999 -- 7,273,103(+) G/T intron_variant
rs1001687299 -- 7,272,644(+) A/G upstream_transcript_variant
rs1002009801 -- 7,271,770(+) A/G upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374643 Gene

Disorders for LOC105374643 Gene

No disorders were found for LOC105374643 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374643 Gene

Publications for LOC105374643 Gene

No publications were found for LOC105374643 Gene.

Products for LOC105374643 Gene

Sources for LOC105374643 Gene

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