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Aliases for LOC105374640 Gene

Subcategory (RNA class) for LOC105374640 Gene


Quality Score for this RNA gene is


Aliases for LOC105374640 Gene

  • Uncharacterized LOC105374640 3

External Ids for LOC105374640 Gene

Previous GeneCards Identifiers for LOC105374640 Gene

  • GC02U903373

Summaries for LOC105374640 Gene

GeneCards Summary for LOC105374640 Gene

LOC105374640 (Uncharacterized LOC105374640) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374640 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374640 Gene

Genomics for LOC105374640 Gene

GeneHancer (GH) Regulatory Elements for LOC105374640 Gene

Promoters and enhancers for LOC105374640 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J054554 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 650.7 -1.0 -994 8.8 ZFP64 FEZF1 DMAP1 YY1 ZNF213 ZNF143 NFYC ZNF610 RCOR2 NBN SPTBN1 LOC105374640 EML6 ENSG00000203327 RPS27A RTN4 GC02M054620 PIR49112
GH02J054566 Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -17.2 -17190 16.9 MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 ZNF143 SP3 PPARGC1A EML6 SPTBN1 ENSG00000272156 PRORSD1P ENSG00000238018 LOC105374640 GC02M054620 PIR49112
GH02J054545 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +12.0 11987 2.2 FOXA2 MLX ARID4B DMAP1 YY1 TCF12 ATF7 FOS RXRA SP5 ENSG00000234943 EML6 ENSG00000228108 LOC105374640 SPTBN1
GH02J054584 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -30.9 -30855 9.3 HDGF PKNOX1 SMAD1 FOXA2 MLX ARNT ARID4B FEZF1 DMAP1 ZNF2 EML6 CLHC1 SPTBN1 PRORSD1P PIR49112 GC02M054620 LOC105374640
GH02J054530 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.3 +25.1 25110 4.8 PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 BRCA1 ETS1 YY1 ATF7 EML6 ACYP2 RNU7-172P SPTBN1 CLHC1 GC02M054535 RPL23AP32 ENSG00000228108 LOC105374640
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374640 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374640 Gene

Genomic Locations for LOC105374640 Gene
42,386 bases
Minus strand

Genomic View for LOC105374640 Gene

Genes around LOC105374640 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374640 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374640 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374640 Gene

Proteins for LOC105374640 Gene

Post-translational modifications for LOC105374640 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374640 Gene

Domains & Families for LOC105374640 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374640 Gene

Function for LOC105374640 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374640 Gene

Localization for LOC105374640 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374640 Gene

Pathways & Interactions for LOC105374640 Gene

SuperPathways for LOC105374640 Gene

No Data Available

Interacting Proteins for LOC105374640 Gene

Gene Ontology (GO) - Biological Process for LOC105374640 Gene


No data available for Pathways by source and SIGNOR curated interactions for LOC105374640 Gene

Drugs & Compounds for LOC105374640 Gene

No Compound Related Data Available

Transcripts for LOC105374640 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374640 Gene

No ASD Table

Relevant External Links for LOC105374640 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for LOC105374640 Gene

Expression for LOC105374640 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374640 Gene

Orthologs for LOC105374640 Gene

No data available for Orthologs and Evolution for LOC105374640 Gene

Paralogs for LOC105374640 Gene

No data available for Paralogs for LOC105374640 Gene

Variants for LOC105374640 Gene

Sequence variations from dbSNP and Humsavar for LOC105374640 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000049669 -- 54,544,614(-) C/A genic_upstream_transcript_variant, intron_variant
rs1000205919 -- 54,533,614(-) G/A intron_variant
rs1000220734 -- 54,518,864(-) T/C genic_downstream_transcript_variant, intron_variant
rs1000284840 -- 54,530,476(-) A/C intron_variant
rs1000363711 -- 54,557,509(-) G/A genic_upstream_transcript_variant, intron_variant, non_coding_transcript_variant, upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374640 Gene

Disorders for LOC105374640 Gene

No disorders were found for LOC105374640 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374640 Gene

Publications for LOC105374640 Gene

No publications were found for LOC105374640 Gene.

Products for LOC105374640 Gene

Sources for LOC105374640 Gene

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