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Aliases for LOC105374629 Gene

Subcategory (RNA class) for LOC105374629 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105374629 Gene

  • Uncharacterized LOC105374629 3
  • CTD-2046I8.1 3
  • AC026415.1 5

External Ids for LOC105374629 Gene

Previous GeneCards Identifiers for LOC105374629 Gene

  • GC05U902445

Summaries for LOC105374629 Gene

GeneCards Summary for LOC105374629 Gene

LOC105374629 (Uncharacterized LOC105374629) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374629 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374629 Gene

Genomics for LOC105374629 Gene

GeneHancer (GH) Regulatory Elements for LOC105374629 Gene

Promoters and enhancers for LOC105374629 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I004879 Enhancer 0.7 ENCODE 0.4 +13.4 13393 0.2 CTCF RAD21 TEAD3 CC2D1A GATA3 SMC3 ZNF143 ZNF444 RUNX3 ZNF654 GC05P004883 LOC105374629
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374629 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374629 Gene

Genomic Locations for LOC105374629 Gene
chr5:4,866,490-4,874,759
(GRCh38/hg38)
Size:
8,270 bases
Orientation:
Plus strand
chr5:4,866,634-4,874,872
(GRCh37/hg19)

Genomic View for LOC105374629 Gene

Genes around LOC105374629 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374629 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374629 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374629 Gene

Proteins for LOC105374629 Gene

Post-translational modifications for LOC105374629 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374629 Gene

Domains & Families for LOC105374629 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374629 Gene

Function for LOC105374629 Gene

Phenotypes From GWAS Catalog for LOC105374629 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374629 Gene

Localization for LOC105374629 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374629 Gene

Pathways & Interactions for LOC105374629 Gene

SuperPathways for LOC105374629 Gene

No Data Available

Interacting Proteins for LOC105374629 Gene

Gene Ontology (GO) - Biological Process for LOC105374629 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374629 Gene

Drugs & Compounds for LOC105374629 Gene

No Compound Related Data Available

Transcripts for LOC105374629 Gene

mRNA/cDNA for LOC105374629 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374629 Gene

No ASD Table

Relevant External Links for LOC105374629 Gene

GeneLoc Exon Structure for
LOC105374629

Expression for LOC105374629 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374629 Gene

Orthologs for LOC105374629 Gene

Evolution for LOC105374629 Gene

ENSEMBL:
Gene Tree for LOC105374629 (if available)
TreeFam:
Gene Tree for LOC105374629 (if available)

No data available for Orthologs for LOC105374629 Gene

Paralogs for LOC105374629 Gene

No data available for Paralogs for LOC105374629 Gene

Variants for LOC105374629 Gene

Sequence variations from dbSNP and Humsavar for LOC105374629 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000062907 -- 4,864,991(+) G/C upstream_transcript_variant
rs1000960539 -- 4,864,788(+) T/A upstream_transcript_variant
rs1001555757 -- 4,867,050(+) G/A intron_variant
rs1001734452 -- 4,866,393(+) G/C upstream_transcript_variant
rs1001748853 -- 4,866,554(+) G/A/T non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374629 Gene

Disorders for LOC105374629 Gene

No disorders were found for LOC105374629 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374629 Gene

Publications for LOC105374629 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for LOC105374629 Gene

Sources for LOC105374629 Gene

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