Aliases for LOC105374492 Gene

Data sources for LOC105374492 Gene:

Subcategory (RNA class) for LOC105374492 Gene

ncRNA

Aliases for LOC105374492 Gene

External Ids for LOC105374492 Gene

Previous GeneCards Identifiers for LOC105374492 Gene

  • GC04U902214

Summaries for LOC105374492 Gene

GeneCards Summary for LOC105374492 Gene

LOC105374492 (Uncharacterized LOC105374492) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374492 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105374492 Gene

Genomics for LOC105374492 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105374492 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J012633 Enhancer 0.6 Ensembl 0.4 -10.2 -10193 0.2 CTCF REST TRIM22 SMAD4 MIER3 SMC3 RAD21 TEAD3 MAX ZNF48 lnc-CPEB2-15 LOC105374492 lnc-RAB28-4 RAB28
GH04J012614 Enhancer 0.3 Ensembl 0.4 +7.8 7807 0.2 JUND lnc-CPEB2-16 LOC105374492 lnc-RAB28-3 lnc-RAB28-4 RAB28
GH04J012499 Enhancer 0.9 ENCODE 0.1 +122.6 122634 1.8 MXD4 CEBPA FOXA1 ZFP64 HOMEZ KDM6A FOXA2 ZNF511 MAFF SMAD4 piR-39858-471 piR-48209-530 LOC105374492 lnc-RAB28-4 RAB28
GH04J012605 Enhancer 0.2 Ensembl 0.4 +16.7 16707 1.2 lnc-CPEB2-16 LOC105374492 lnc-RAB28-3 lnc-RAB28-4 RAB28
GH04J012566 Enhancer 0.2 Ensembl 0.2 +56.8 56807 0.2 LINC02360 lnc-RAB28-3 HSALNG0032951 LOC105374490 lnc-CPEB2-16 LOC105374492 lnc-RAB28-4 RAB28
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105374492 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105374492 Gene

Latest Assembly
chr4:12,469,842-12,622,908
(GRCh38/hg38)
Size:
153,067 bases
Orientation:
Minus strand

Genomic View for LOC105374492 Gene

Genes around LOC105374492 on UCSC Golden Path with GeneCards custom track
LOC105374492 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105374492 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374492 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374492 Gene

Proteins for LOC105374492 Gene

Post-translational modifications for LOC105374492 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374492 Gene

Domains & Families for LOC105374492 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105374492 Gene

Function for LOC105374492 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374492 Gene

Localization for LOC105374492 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374492 Gene

Pathways & Interactions for LOC105374492 Gene

PathCards logo

SuperPathways for LOC105374492 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105374492 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105374492 Gene

Drugs & Compounds for LOC105374492 Gene

No Compound Related Data Available

Transcripts for LOC105374492 Gene

LOC105374492 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374492 Gene

No ASD Table

Relevant External Links for LOC105374492 Gene

GeneLoc Exon Structure for
LOC105374492

No data available for mRNA/cDNA for LOC105374492 Gene

Expression for LOC105374492 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374492 Gene

Orthologs for LOC105374492 Gene

No data available for Orthologs and Evolution for LOC105374492 Gene

Paralogs for LOC105374492 Gene

No data available for Paralogs for LOC105374492 Gene

Variants for LOC105374492 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105374492 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374492 Gene

Disorders for LOC105374492 Gene

No disorders were found for LOC105374492 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374492 Gene

Publications for LOC105374492 Gene

No publications were found for LOC105374492 Gene.

No data available for Mastermind for LOC105374492 Gene

Products for LOC105374492 Gene

Sources for LOC105374492 Gene