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Aliases for LOC105374363 Gene

Subcategory (RNA class) for LOC105374363 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374363 Gene

  • Uncharacterized LOC105374363 3
  • AC074117.1 5

External Ids for LOC105374363 Gene

Previous GeneCards Identifiers for LOC105374363 Gene

  • GC02U903471

Summaries for LOC105374363 Gene

GeneCards Summary for LOC105374363 Gene

LOC105374363 (Uncharacterized LOC105374363) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374363 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374363 Gene

Genomics for LOC105374363 Gene

GeneHancer (GH) Regulatory Elements for LOC105374363 Gene

Promoters and enhancers for LOC105374363 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J027355 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 650.7 +0.9 878 3.4 MLX ZFP64 DMAP1 YY1 E2F8 ZNF143 SP3 NFYC PPARGC1A SSRP1 GTF3C2 LOC105374363 SNX17 EIF2B4 GPN1 CAD GTF3C2-AS1 NRBP1 KRTCAP3 GC02P027359
GH02J027662 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 60.4 +307.4 307400 2.4 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 SUPT7L SLC4A1AP GTF3C2 CAD GPN1 IFT172 ZNF512 SNX17 NRBP1 LOC105374363
GH02J027069 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 38.1 -279.8 -279752 14.9 CLOCK MLX DMAP1 YBX1 IRF4 YY1 SLC30A9 E2F8 ZNF143 MCM3 EMILIN1 OST4 CAD GTF3C2 SNX17 NRBP1 LOC105374363 GPN1 KHK TMEM214
GH02J027049 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 45.3 -305.2 -305177 3.2 MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 AGBL5-AS1 GC02P027055 PIR59385 TRY-GTA2-1 PIR54422 AGBL5 CAD EIF2B4 GPN1 NRBP1
GH02J027626 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 21.3 +271.9 271905 3.8 HDGF PKNOX1 SMAD1 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 YY1 GPN1 CCDC121 CAD EIF2B4 SNX17 GTF3C2 NRBP1 ZNF513 GTF3C2-AS1 PPM1G
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374363 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374363 Gene

Genomic Locations for LOC105374363 Gene
chr2:27,356,246-27,367,622
(GRCh38/hg38)
Size:
11,377 bases
Orientation:
Plus strand
chr2:27,579,113-27,590,489
(GRCh37/hg19)

Genomic View for LOC105374363 Gene

Genes around LOC105374363 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374363 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374363 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374363 Gene

Proteins for LOC105374363 Gene

Post-translational modifications for LOC105374363 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374363 Gene

Domains & Families for LOC105374363 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374363 Gene

Function for LOC105374363 Gene

Phenotypes From GWAS Catalog for LOC105374363 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374363 Gene

Localization for LOC105374363 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374363 Gene

Pathways & Interactions for LOC105374363 Gene

SuperPathways for LOC105374363 Gene

No Data Available

Interacting Proteins for LOC105374363 Gene

Gene Ontology (GO) - Biological Process for LOC105374363 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374363 Gene

Drugs & Compounds for LOC105374363 Gene

No Compound Related Data Available

Transcripts for LOC105374363 Gene

mRNA/cDNA for LOC105374363 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(3) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374363 Gene

No ASD Table

Relevant External Links for LOC105374363 Gene

GeneLoc Exon Structure for
LOC105374363

Expression for LOC105374363 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374363 Gene

Orthologs for LOC105374363 Gene

Evolution for LOC105374363 Gene

ENSEMBL:
Gene Tree for LOC105374363 (if available)
TreeFam:
Gene Tree for LOC105374363 (if available)

No data available for Orthologs for LOC105374363 Gene

Paralogs for LOC105374363 Gene

No data available for Paralogs for LOC105374363 Gene

Variants for LOC105374363 Gene

Sequence variations from dbSNP and Humsavar for LOC105374363 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000054444 -- 27,357,770(+) A/G intron_variant
rs1000205247 -- 27,354,276(+) T/G upstream_transcript_variant
rs1000464318 -- 27,356,677(+) C/T non_coding_transcript_variant
rs1001059047 -- 27,356,828(+) T/G non_coding_transcript_variant
rs1001105197 -- 27,358,134(+) G/T non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374363 Gene

Disorders for LOC105374363 Gene

Additional Disease Information for LOC105374363

No disorders were found for LOC105374363 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105374363 Gene

Publications for LOC105374363 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for LOC105374363 Gene

Sources for LOC105374363 Gene

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