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Aliases for LOC105374353 Gene

Subcategory (RNA class) for LOC105374353 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374353 Gene

  • Uncharacterized LOC105374353 3
  • AL645924.1 5

External Ids for LOC105374353 Gene

Previous GeneCards Identifiers for LOC105374353 Gene

  • GC04U902269

Summaries for LOC105374353 Gene

GeneCards Summary for LOC105374353 Gene

LOC105374353 (Uncharacterized LOC105374353) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374353 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374353 Gene

Genomics for LOC105374353 Gene

GeneHancer (GH) Regulatory Elements for LOC105374353 Gene

Promoters and enhancers for LOC105374353 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J002462 Promoter/Enhancer 1.3 Ensembl ENCODE 650.7 -0.2 -192 1.2 ELF3 RB1 SIN3A ZNF48 RAD21 ZNF335 ZNF121 ZNF143 THAP11 SMARCA5 RNF4 GC04M002457 LOC105374353 ZFYVE28 CFAP99
GH04J002361 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE 11.3 -99.6 -99563 4.5 FOXA2 PKNOX1 ATF1 YY1 RXRA REST ZNF592 NFIL3 GMEB1 SMARCA4 ZFYVE28 ENSG00000251148 MXD4 CFAP99 LOC105374353 RNF4 HAUS3 POLN NELFA C4orf48
GH04J002401 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 11.4 -60.6 -60613 1.2 HDAC1 PKNOX1 SIN3A ZNF48 EGR1 KLF7 ATF7 EGR2 SP3 SP5 ZFYVE28 RNF4 LOC105374353 ENSG00000251148 MXD4 POLN HAUS3 NELFA C4orf48 GC04P002406
GH04J002481 Enhancer 1.2 Ensembl ENCODE dbSUPER 13 +21.4 21408 5.6 HDGF PKNOX1 BATF IRF4 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 CREM GC04P002484 RNF4 ZFYVE28 TNIP2 LOC105374353 MXD4 POLN HAUS3 ENSG00000251148 SH3BP2
GH04J002489 Enhancer 1.1 Ensembl ENCODE dbSUPER 12.3 +27.1 27093 1.8 BACH1 CEBPG GATA3 ZNF766 TRIM24 ZNF600 ZNF197 E2F5 CEBPB EP300 RNF4 HAUS3 NELFA FAM193A ENSG00000270195 LOC105374353 ZFYVE28 ENSG00000251148 MXD4 POLN
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374353 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374353 Gene

Genomic Locations for LOC105374353 Gene
chr4:2,463,014-2,466,198
(GRCh38/hg38)
Size:
3,185 bases
Orientation:
Plus strand
chr4:2,465,524-2,465,851
(GRCh37/hg19)

Genomic View for LOC105374353 Gene

Genes around LOC105374353 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374353 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374353 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374353 Gene

Proteins for LOC105374353 Gene

Post-translational modifications for LOC105374353 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374353 Gene

Domains & Families for LOC105374353 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374353 Gene

Function for LOC105374353 Gene

Phenotypes From GWAS Catalog for LOC105374353 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374353 Gene

Localization for LOC105374353 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374353 Gene

Pathways & Interactions for LOC105374353 Gene

SuperPathways for LOC105374353 Gene

No Data Available

Interacting Proteins for LOC105374353 Gene

Gene Ontology (GO) - Biological Process for LOC105374353 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374353 Gene

Drugs & Compounds for LOC105374353 Gene

No Compound Related Data Available

Transcripts for LOC105374353 Gene

mRNA/cDNA for LOC105374353 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374353 Gene

No ASD Table

Relevant External Links for LOC105374353 Gene

GeneLoc Exon Structure for
LOC105374353

Expression for LOC105374353 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374353 Gene

Orthologs for LOC105374353 Gene

Evolution for LOC105374353 Gene

ENSEMBL:
Gene Tree for LOC105374353 (if available)
TreeFam:
Gene Tree for LOC105374353 (if available)

No data available for Orthologs for LOC105374353 Gene

Paralogs for LOC105374353 Gene

No data available for Paralogs for LOC105374353 Gene

Variants for LOC105374353 Gene

Sequence variations from dbSNP and Humsavar for LOC105374353 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1000059398 -- 2,462,413(+) T/G upstream_transcript_variant
rs1000111453 -- 2,462,198(+) A/G upstream_transcript_variant
rs1000349463 -- 2,466,645(+) A/C/G downstream_transcript_variant
rs1000384196 -- 2,466,186(+) G/A non_coding_transcript_variant
rs1000711906 -- 2,461,883(+) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374353 Gene

Disorders for LOC105374353 Gene

No disorders were found for LOC105374353 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374353 Gene

Publications for LOC105374353 Gene

No publications were found for LOC105374353 Gene.

Products for LOC105374353 Gene

Sources for LOC105374353 Gene

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