Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105374352 Gene

Subcategory (RNA class) for LOC105374352 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374352 Gene

  • Uncharacterized LOC105374352 3

External Ids for LOC105374352 Gene

Previous GeneCards Identifiers for LOC105374352 Gene

  • GC04U902464

Summaries for LOC105374352 Gene

GeneCards Summary for LOC105374352 Gene

LOC105374352 (Uncharacterized LOC105374352) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374352 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374352 Gene

Genomics for LOC105374352 Gene

GeneHancer (GH) Regulatory Elements for LOC105374352 Gene

Promoters and enhancers for LOC105374352 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I002361 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE 0.4 -18.8 -18791 4.5 HDAC1 FOXA2 PKNOX1 ATF1 RB1 RAD21 YY1 EGR1 CREM SMAD5 ZFYVE28 ENSG00000251148 MXD4 CFAP99 LOC105374353 RNF4 HAUS3 POLN NELFA C4orf48
GH04I002352 Enhancer 0.6 FANTOM5 ENCODE 0.4 -8.8 -8827 1.1 POLR2A GLIS1 ZFYVE28 ENSG00000251148 MXD4 HAUS3 POLN RNF4 LOC105374353 ENSG00000250623 NAT8L LOC105374352
GH04I002355 Enhancer 0.4 ENCODE 0.4 -9.7 -9739 0 CTCF SMC3 RAD21 ENSG00000251148 ZFYVE28 MXD4 HAUS3 POLN LOC105374353 RNF4 ENSG00000250623 LOC105374352 GC04M002328
GH04I002354 Enhancer 0.4 ENCODE 0.4 -10.2 -10243 0.6 CTCF ZNF335 PKNOX1 ZFYVE28 ENSG00000251148 MXD4 HAUS3 POLN LOC105374353 RNF4 ENSG00000250623 LOC105374352 GC04M002328
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374352 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374352 Gene

Genomic Locations for LOC105374352 Gene
chr4:2,342,581-2,344,660
(GRCh38/hg38)
Size:
2,080 bases
Orientation:
Minus strand

Genomic View for LOC105374352 Gene

Genes around LOC105374352 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374352 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374352 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374352 Gene

Proteins for LOC105374352 Gene

Post-translational modifications for LOC105374352 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374352 Gene

Domains & Families for LOC105374352 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374352 Gene

Function for LOC105374352 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374352 Gene

Localization for LOC105374352 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374352 Gene

Pathways & Interactions for LOC105374352 Gene

SuperPathways for LOC105374352 Gene

No Data Available

Interacting Proteins for LOC105374352 Gene

Gene Ontology (GO) - Biological Process for LOC105374352 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374352 Gene

Drugs & Compounds for LOC105374352 Gene

No Compound Related Data Available

Transcripts for LOC105374352 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374352 Gene

No ASD Table

Relevant External Links for LOC105374352 Gene

GeneLoc Exon Structure for
LOC105374352

No data available for mRNA/cDNA for LOC105374352 Gene

Expression for LOC105374352 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374352 Gene

Orthologs for LOC105374352 Gene

No data available for Orthologs and Evolution for LOC105374352 Gene

Paralogs for LOC105374352 Gene

No data available for Paralogs for LOC105374352 Gene

Variants for LOC105374352 Gene

Sequence variations from dbSNP and Humsavar for LOC105374352 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1000253096 -- 2,346,512(-) A/T upstream_transcript_variant
rs1001193176 -- 2,345,056(-) AAAAAAAA/AAAAAAA/AAAAAAAAA upstream_transcript_variant
rs1001654729 -- 2,344,929(-) C/T upstream_transcript_variant
rs1001727275 -- 2,345,093(-) G/A upstream_transcript_variant
rs1003465495 -- 2,343,441(-) A/C non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374352 Gene

Disorders for LOC105374352 Gene

No disorders were found for LOC105374352 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374352 Gene

Publications for LOC105374352 Gene

No publications were found for LOC105374352 Gene.

Products for LOC105374352 Gene

Sources for LOC105374352 Gene

Content
Loading form....