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Aliases for LOC105374349 Gene

Subcategory (RNA class) for LOC105374349 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374349 Gene

  • Uncharacterized LOC105374349 3

External Ids for LOC105374349 Gene

Previous GeneCards Identifiers for LOC105374349 Gene

  • GC04U901917

Summaries for LOC105374349 Gene

GeneCards Summary for LOC105374349 Gene

LOC105374349 (Uncharacterized LOC105374349) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374349 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374349 Gene

Genomics for LOC105374349 Gene

GeneHancer (GH) Regulatory Elements for LOC105374349 Gene

Promoters and enhancers for LOC105374349 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J001629 Enhancer 0.7 Ensembl 650.7 -0.4 -438 0.2 CTCF RB1 KLF17 ERF RBPJ RAD21 CC2D1A ARID2 SMC3 ZNF143 LOC105374349 ENSG00000207009 FAM53A GC04M001683
GH04J001615 Enhancer 0.7 ENCODE 0.4 +13.5 13461 1.2 KLF1 SIN3A PAX8 KLF14 ZEB1 KLF7 ZNF444 KLF8 CEBPB KLF4 TMEM129 RNF212 LOC105374349 ENSG00000244459 FAM53A
GH04J001644 Enhancer 0.6 Ensembl ENCODE 0.4 -16.2 -16249 1.7 SP1 ZNF341 FAM53A TMEM129 LOC105374349 GC04M001683 ENSG00000207009
GH04J001590 Enhancer 0.7 ENCODE 0.3 +38.7 38674 0.2 TEAD4 TAL1 TCF12 NCOR1 VEZF1 CBFA2T2 ATF7 TRIM24 SMARCE1 SOX6 ENSG00000272783 ENSG00000244459 LOC105374349 FAM53A
GH04J001611 Enhancer 0.5 VISTA 0.4 +17.0 16997 0.6 NFATC1 FAM53A LOC105374349 ENSG00000244459
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374349 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374349 Gene

Genomic Locations for LOC105374349 Gene
chr4:1,627,370-1,629,063
(GRCh38/hg38)
Size:
1,694 bases
Orientation:
Minus strand

Genomic View for LOC105374349 Gene

Genes around LOC105374349 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374349 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374349 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374349 Gene

Proteins for LOC105374349 Gene

Post-translational modifications for LOC105374349 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374349 Gene

Domains & Families for LOC105374349 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374349 Gene

Function for LOC105374349 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374349 Gene

Localization for LOC105374349 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374349 Gene

Pathways & Interactions for LOC105374349 Gene

SuperPathways for LOC105374349 Gene

No Data Available

Interacting Proteins for LOC105374349 Gene

Gene Ontology (GO) - Biological Process for LOC105374349 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374349 Gene

Drugs & Compounds for LOC105374349 Gene

No Compound Related Data Available

Transcripts for LOC105374349 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374349 Gene

No ASD Table

Relevant External Links for LOC105374349 Gene

GeneLoc Exon Structure for
LOC105374349

No data available for mRNA/cDNA for LOC105374349 Gene

Expression for LOC105374349 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374349 Gene

Orthologs for LOC105374349 Gene

No data available for Orthologs and Evolution for LOC105374349 Gene

Paralogs for LOC105374349 Gene

No data available for Paralogs for LOC105374349 Gene

Variants for LOC105374349 Gene

Sequence variations from dbSNP and Humsavar for LOC105374349 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1000526416 -- 1,629,414(-) T/G non_coding_transcript_variant
rs1000922580 -- 1,630,349(-) C/T upstream_transcript_variant
rs1001438588 -- 1,630,457(-) G/A upstream_transcript_variant
rs1001547771 -- 1,627,352(-) C/T non_coding_transcript_variant
rs1001662319 -- 1,627,569(-) G/C non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374349 Gene

Disorders for LOC105374349 Gene

No disorders were found for LOC105374349 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374349 Gene

Publications for LOC105374349 Gene

No publications were found for LOC105374349 Gene.

Products for LOC105374349 Gene

Sources for LOC105374349 Gene

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